Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10022941m |
Family | CE8 |
Protein Properties | Length: 547 Molecular Weight: 59855.8 Isoelectric Point: 9.9165 |
Chromosome | Chromosome/Scaffold: 4 Start: 13871709 End: 13874134 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 242 | 531 | 0 |
AVVAKDGSGNFKTIKDAINAASGSGRFVIYVKQGVYSENLEIRKKNVMLRGDGKGKTIITGSRSVGGGTTTFNSATVAAVGDAFIARGITFRNTAGANNA QAVALRSGSDLSVFYQCSFEGYQDTLYVHSNRQFYRDCDIYGTVDFIFGNAAAVLQNCNIFARRPRSKTNTITAQGRSDPNQNTGIIIHNSRVTAASDLR PVLGSTKTYLGRPWRQYSRTVFMKTSLDSLIDPRGWLEWNGNFALKTLFYAEFQNTGPGASTSSRVTWPGFRVLGSASEASKFTVGTFLA |
Full Sequence |
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Protein Sequence Length: 547 Download |
NKKASATPHL YKHIDSHQSQ YLQTQTSLFS KAFGLIMAFR ANITTFVFLC ILVASTVSGY 60 NRKDVEKWCS QTPNPKPCEY FLTHNSDNKP IKSESEFLKI SMKLALDRAV LAKTHASTLG 120 PKCRDTREKA AWEDCIKLYD FTVSNINGTM DPNVKCSKTD AQTWLSTALT NLDTCRNGFL 180 ELGVTDMVLP LMSNNVSNLI CNTLAINKVP FNYTAPEKDG FPSWVKPGDR KLLQTSAPKD 240 NAVVAKDGSG NFKTIKDAIN AASGSGRFVI YVKQGVYSEN LEIRKKNVML RGDGKGKTII 300 TGSRSVGGGT TTFNSATVAA VGDAFIARGI TFRNTAGANN AQAVALRSGS DLSVFYQCSF 360 EGYQDTLYVH SNRQFYRDCD IYGTVDFIFG NAAAVLQNCN IFARRPRSKT NTITAQGRSD 420 PNQNTGIIIH NSRVTAASDL RPVLGSTKTY LGRPWRQYSR TVFMKTSLDS LIDPRGWLEW 480 NGNFALKTLF YAEFQNTGPG ASTSSRVTWP GFRVLGSASE ASKFTVGTFL AGGSWIPSSV 540 PFTSGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02170 | PLN02170 | 1.0e-151 | 24 | 546 | 546 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 7.0e-158 | 20 | 546 | 564 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-165 | 16 | 546 | 552 | + pectinesterase/pectinesterase inhibitor | ||
PLN02995 | PLN02995 | 1.0e-179 | 46 | 546 | 526 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 241 | 532 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_566038.1 | 0 | 36 | 546 | 1 | 511 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002280446.1 | 0 | 43 | 546 | 2 | 513 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302526.1 | 0 | 37 | 546 | 1 | 514 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320714.1 | 0 | 37 | 546 | 1 | 514 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511679.1 | 0 | 56 | 546 | 19 | 514 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 234 | 546 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 241 | 546 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 7e-35 | 241 | 538 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 7e-35 | 241 | 538 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 7e-35 | 241 | 538 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |