| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10022977m |
| Family | GH9 |
| Protein Properties | Length: 532 Molecular Weight: 59969.4 Isoelectric Point: 6.1762 |
| Chromosome | Chromosome/Scaffold: 4 Start: 8817713 End: 8820807 |
| Description | glycosyl hydrolase 9B8 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 45 | 508 | 0 |
| DYGDALSKSLLYFEAQRSGRLPYNQRVTWRDHSGLTDGLEQGVDLVGGYHDAGDHVKFGLPMAFTVTMLSWSVIEYGDSLASTGELSHALEAIKWGTDYF IKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRRAFKIDENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLLHHAQQLFEFGDKYRGKYDESLKVVK SYYASVSGYMDELLWGATWLYRATDNEHYMSYVVDMAHQLGGLSWAMSEFSWDVKFAGVQLLASMLLKEEKHKQHSKVLQQYKSKADHYLCSILNKNING TNVQRTPAGLLYVRQWNNMQYVSTASFLLTVYSDHLRKSNTDLECHQGTVTPDEMLVFAKSQIDYILGSNPMETSYLVGYGPKYPTKVHHRGASIASFKE HKGFIGCTQGYDNWYGRPEPNPSVLVGALVGGPDHQDDFDDRRDNYVQTEACTYNTAPLVGVFA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 532 Download |
| MAERRNHRHK QWRLLLILLL LLLITIFSPV TLAGLSSETD VGGFDYGDAL SKSLLYFEAQ 60 RSGRLPYNQR VTWRDHSGLT DGLEQGVDLV GGYHDAGDHV KFGLPMAFTV TMLSWSVIEY 120 GDSLASTGEL SHALEAIKWG TDYFIKAHTS PNVLWAEVGD GDTDHYCWQR PEDMTTSRRA 180 FKIDENNPGS DIAGETAAAM AAASIVFRST NPHYSHLLLH HAQQLFEFGD KYRGKYDESL 240 KVVKSYYASV SGYMDELLWG ATWLYRATDN EHYMSYVVDM AHQLGGLSWA MSEFSWDVKF 300 AGVQLLASML LKEEKHKQHS KVLQQYKSKA DHYLCSILNK NINGTNVQRT PAGLLYVRQW 360 NNMQYVSTAS FLLTVYSDHL RKSNTDLECH QGTVTPDEML VFAKSQIDYI LGSNPMETSY 420 LVGYGPKYPT KVHHRGASIA SFKEHKGFIG CTQGYDNWYG RPEPNPSVLV GALVGGPDHQ 480 DDFDDRRDNY VQTEACTYNT APLVGVFARL IELEEQKLEE DDVSLVATYK R* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02420 | PLN02420 | 0 | 3 | 529 | 527 | + endoglucanase | ||
| PLN02171 | PLN02171 | 0 | 42 | 511 | 470 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 30 | 517 | 488 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 45 | 508 | 466 | + Glycosyl hydrolase family 9. | ||
| PLN00119 | PLN00119 | 0 | 45 | 510 | 466 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN81074.1 | 0 | 44 | 529 | 27 | 547 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_180858.1 | 0 | 6 | 531 | 5 | 525 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | XP_002321149.1 | 0 | 10 | 529 | 22 | 526 | glycosyl hydrolase family 9 [Populus trichocarpa] |
| RefSeq | XP_002525326.1 | 0 | 18 | 529 | 27 | 527 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| RefSeq | XP_002529469.1 | 0 | 44 | 524 | 27 | 501 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 44 | 513 | 3 | 431 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1ksc_A | 0 | 44 | 513 | 3 | 431 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1ks8_A | 0 | 44 | 513 | 3 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 44 | 512 | 4 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 44 | 512 | 4 | 442 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
