Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10023013m |
Family | CE8 |
Protein Properties | Length: 520 Molecular Weight: 56365.4 Isoelectric Point: 8.4439 |
Chromosome | Chromosome/Scaffold: 4 Start: 13086336 End: 13088079 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 214 | 501 | 0 |
AVVAADGSGTHKTVGEALLATSLASSTGGRTVIHMKAGTYHENINIPTKQKNVMLVGDGKGITVIVGSRSNRGGWTTYKTATVAAMGEGFIARDITFVNN AGPQSEQAVALRVGADKSVVYRCSVVGYQDSLYTHSKRQFYRETDIYGTVDFIFGNSVVVFQACNIVARKPLSGQKNFVTAQGRTDPGQNTGISIQNCKI TAESMTYLGRPWKAYSRTVVMQSFLGGSIDPSGWSPWSGGFGLKSLYYGEYGNTGPGSSVSGRVKWTGYHSALTVTEAEKFTVAGFIG |
Full Sequence |
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Protein Sequence Length: 520 Download |
MAFSSSISNH NILIKALMFL LVVNFLYLLQ TTSAVTSSDS NSHFSRFSRH QSSPSSRTKE 60 GFLASVQESK NHALLARSLA FNLTLSHRTL QTHTVDPIHD CLELLDDTLD MLSRIHADND 120 DEDVHTWLSA ALTNQDTCEQ SLQEKSNSYK HGPAMDFVAR NLTGLLTNSL DLFVSVKSKH 180 GRLLSEQNSI PTFVTSSEQR RLLEASVEEL KVDAVVAADG SGTHKTVGEA LLATSLASST 240 GGRTVIHMKA GTYHENINIP TKQKNVMLVG DGKGITVIVG SRSNRGGWTT YKTATVAAMG 300 EGFIARDITF VNNAGPQSEQ AVALRVGADK SVVYRCSVVG YQDSLYTHSK RQFYRETDIY 360 GTVDFIFGNS VVVFQACNIV ARKPLSGQKN FVTAQGRTDP GQNTGISIQN CKITAESMTY 420 LGRPWKAYSR TVVMQSFLGG SIDPSGWSPW SGGFGLKSLY YGEYGNTGPG SSVSGRVKWT 480 GYHSALTVTE AEKFTVAGFI GGNMWLPSTG VSFDSGLIK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 2.0e-138 | 85 | 517 | 469 | + pectinesterase | ||
PLN02484 | PLN02484 | 4.0e-152 | 75 | 517 | 471 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-158 | 100 | 517 | 435 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 6.0e-173 | 213 | 503 | 300 | + Pectinesterase. | ||
PLN02170 | PLN02170 | 0 | 1 | 518 | 534 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK69695.1 | 0 | 25 | 518 | 14 | 549 | putative pectin methylesterase LuPME1 [Linum usitatissimum] |
EMBL | CBI39447.1 | 0 | 180 | 518 | 98 | 431 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_181833.1 | 0 | 1 | 518 | 1 | 517 | ATPMEPCRD; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_191460.1 | 0 | 33 | 518 | 30 | 529 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002527752.1 | 0 | 123 | 518 | 174 | 582 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 213 | 517 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 213 | 517 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 2e-18 | 217 | 508 | 12 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 2e-18 | 217 | 508 | 12 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 2e-18 | 217 | 508 | 12 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |