Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10023074m |
Family | GH1 |
Protein Properties | Length: 497 Molecular Weight: 56868.8 Isoelectric Point: 5.5729 |
Chromosome | Chromosome/Scaffold: 4 Start: 3343193 End: 3349237 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 15 | 490 | 0 |
HSFPDGFLFGTAGSSFQYEGATNEGGKSPSIWDHFSHTYPERTKMHNGDVALDFYHRYKDDIKLMKEINMDSFRFSISWSRIIPTGKLKDGVNKEGVQFY KDLIDELLANDIQPSMTLYHWDHPQSLDDEYGGFLSPKIVEDFRDFARVCFEELGDKVKMWTTINEPYIMAIAGYDNGNKAPGRCSSWVNEISQAGDSST EPYIVSHNTLLAHATAVDEFRKCKKISHDSKIGIVLAPIWHEPYNSDSDDDKDAVERALAFEIGWHLDPLIYGDYPETVKKYAGDKLPLFTTEQSQLLKG STDFVGINYYTARFATLLDDIDPEKPRCKTDNLVERKLADHSGHIIGNGVGSGLILSYPEGLRKVLNYVKDKYNNIPVYIKENGIHETDDGTRPREEILN DTFRIDYFKAHFEALHNAIVKDGCDVRGHYAWSMMDNFEWEHGYTVRFGLYYVDYADGLKRYPKDSAKWFKKFLER |
Full Sequence |
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Protein Sequence Length: 497 Download |
MKMANTIDSL KLDRHSFPDG FLFGTAGSSF QYEGATNEGG KSPSIWDHFS HTYPERTKMH 60 NGDVALDFYH RYKDDIKLMK EINMDSFRFS ISWSRIIPTG KLKDGVNKEG VQFYKDLIDE 120 LLANDIQPSM TLYHWDHPQS LDDEYGGFLS PKIVEDFRDF ARVCFEELGD KVKMWTTINE 180 PYIMAIAGYD NGNKAPGRCS SWVNEISQAG DSSTEPYIVS HNTLLAHATA VDEFRKCKKI 240 SHDSKIGIVL APIWHEPYNS DSDDDKDAVE RALAFEIGWH LDPLIYGDYP ETVKKYAGDK 300 LPLFTTEQSQ LLKGSTDFVG INYYTARFAT LLDDIDPEKP RCKTDNLVER KLADHSGHII 360 GNGVGSGLIL SYPEGLRKVL NYVKDKYNNI PVYIKENGIH ETDDGTRPRE EILNDTFRID 420 YFKAHFEALH NAIVKDGCDV RGHYAWSMMD NFEWEHGYTV RFGLYYVDYA DGLKRYPKDS 480 AKWFKKFLER SVGETK* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02849 | PLN02849 | 3.0e-131 | 9 | 489 | 488 | + beta-glucosidase |
COG2723 | BglB | 6.0e-134 | 17 | 486 | 481 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] |
PLN02814 | PLN02814 | 1.0e-137 | 14 | 492 | 481 | + beta-glucosidase |
TIGR03356 | BGL | 2.0e-140 | 18 | 484 | 473 | + beta-galactosidase. |
pfam00232 | Glyco_hydro_1 | 4.0e-162 | 16 | 490 | 478 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC16092.1 | 0 | 8 | 489 | 25 | 500 | putative beta-glucosidase [Arabidopsis thaliana] |
GenBank | AAG23719.1 | 0 | 3 | 495 | 17 | 510 | beta-glucosidase [Arabidopsis thaliana] |
RefSeq | NP_001118524.1 | 0 | 8 | 492 | 25 | 509 | BGLU29 (BETA GLUCOSIDASE 29); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_191573.1 | 0 | 3 | 495 | 17 | 510 | DIN2 (DARK INDUCIBLE 2); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | NP_850416.1 | 0 | 8 | 489 | 25 | 505 | BGLU28 (BETA GLUCOSIDASE 28); catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 5 | 488 | 22 | 503 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module Glu234ala Mutant (bjchi3-e234a) |
PDB | 3ptq_A | 0 | 5 | 488 | 22 | 503 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module Glu234ala Mutant (bjchi3-e234a) |
PDB | 3ptm_B | 0 | 5 | 488 | 22 | 503 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module Glu234ala Mutant (bjchi3-e234a) |
PDB | 3ptm_A | 0 | 5 | 488 | 22 | 503 | A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module Glu234ala Mutant (bjchi3-e234a) |
PDB | 3ptk_B | 0 | 5 | 488 | 22 | 503 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AM391838 | 269 | 21 | 289 | 0 |
AM391780 | 254 | 36 | 289 | 0 |
FD533594 | 238 | 3 | 240 | 0 |
AM391791 | 232 | 3 | 234 | 0 |
EX095686 | 230 | 3 | 232 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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