| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10023082m |
| Family | GH9 |
| Protein Properties | Length: 495 Molecular Weight: 53844.5 Isoelectric Point: 5.4199 |
| Chromosome | Chromosome/Scaffold: 4 Start: 13603827 End: 13606029 |
| Description | glycosyl hydrolase 9B12 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 35 | 491 | 0 |
| NYGEALTKSLLYFEAQRSGKLPSNQRVTWRGDSALRDGFDAHIDLSGGYYDAGDNVKFGFPLAFTTTMLAWSCVEMESQLKAHEEHENALAALKWATDYL IKAHPEPNVLYGQVGDANLDHACWMRPEDMTTPRPSYRIDAQHPGSDLAGETAAAMAAASLAFASSDPVYAKTLTDHAKDLFRFGKDYRGVYHSSIPNAG GFYPSSGYEDELLWAAAWLHRATGDQAYLDYLTQASSSGGVSFVFAWDNKFLGAQVLVAKLVFEGKVKNEGKMTEYKSMAEQFICNCAQKGSNNVKKTPG GLLWFLPWDNLQYTATASFVLVTYAKYLEAAQTSVRCPDGGILQASDLLSLARAQVDYVLGSNPKNMSYMVGYGTNYPKRPHHRGSSIVSIKNDPKPVTC NGGYEAWYNNPKPNPNVLVGAIVGGPDENDAYGDERSDYQHDEPDTVTVAPLVGILA | |||
| Full Sequence |
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| Protein Sequence Length: 495 Download |
| MFCVSSQRFV TIEGICVVLS LLLSISLGAV SANSNYGEAL TKSLLYFEAQ RSGKLPSNQR 60 VTWRGDSALR DGFDAHIDLS GGYYDAGDNV KFGFPLAFTT TMLAWSCVEM ESQLKAHEEH 120 ENALAALKWA TDYLIKAHPE PNVLYGQVGD ANLDHACWMR PEDMTTPRPS YRIDAQHPGS 180 DLAGETAAAM AAASLAFASS DPVYAKTLTD HAKDLFRFGK DYRGVYHSSI PNAGGFYPSS 240 GYEDELLWAA AWLHRATGDQ AYLDYLTQAS SSGGVSFVFA WDNKFLGAQV LVAKLVFEGK 300 VKNEGKMTEY KSMAEQFICN CAQKGSNNVK KTPGGLLWFL PWDNLQYTAT ASFVLVTYAK 360 YLEAAQTSVR CPDGGILQAS DLLSLARAQV DYVLGSNPKN MSYMVGYGTN YPKRPHHRGS 420 SIVSIKNDPK PVTCNGGYEA WYNNPKPNPN VLVGAIVGGP DENDAYGDER SDYQHDEPDT 480 VTVAPLVGIL AAIA* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02266 | PLN02266 | 2.0e-174 | 32 | 494 | 473 | + endoglucanase | ||
| PLN00119 | PLN00119 | 0 | 1 | 494 | 494 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 0 | 35 | 491 | 463 | + Glycosyl hydrolase family 9. | ||
| PLN02171 | PLN02171 | 0 | 32 | 494 | 469 | + endoglucanase | ||
| PLN02340 | PLN02340 | 0 | 29 | 491 | 469 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01119.1 | 0 | 5 | 405 | 1 | 399 | putative glucanase [Arabidopsis thaliana] |
| RefSeq | NP_181982.1 | 0 | 15 | 493 | 16 | 490 | AtGH9B9 (Arabidopsis thaliana glycosyl hydrolase 9B9); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181983.1 | 0 | 15 | 493 | 16 | 489 | AtGH9B10 (Arabidopsis thaliana glycosyl hydrolase 9B10); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181984.1 | 0 | 15 | 494 | 16 | 491 | AtGH9B11 (Arabidopsis thaliana glycosyl hydrolase 9B11); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| RefSeq | NP_181985.1 | 0 | 1 | 494 | 1 | 492 | AtGH9B12 (Arabidopsis thaliana glycosyl hydrolase 9B12); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 35 | 493 | 4 | 428 | H Chain H, Structure Of A Catalytic Antibody Igg2a Fab Fragment (D2.3) |
| PDB | 1ksc_A | 0 | 35 | 493 | 4 | 428 | H Chain H, Structure Of A Catalytic Antibody Igg2a Fab Fragment (D2.3) |
| PDB | 1ks8_A | 0 | 35 | 493 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 35 | 477 | 5 | 424 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 35 | 477 | 5 | 424 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO783495 | 379 | 38 | 410 | 0 |
| DR369143 | 224 | 28 | 251 | 0 |
| EC958178 | 257 | 31 | 287 | 0 |
| DY287831 | 363 | 35 | 385 | 0 |
| AU237746 | 218 | 5 | 222 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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