Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10023375m |
Family | GH17 |
Protein Properties | Length: 395 Molecular Weight: 43904.5 Isoelectric Point: 8.5427 |
Chromosome | Chromosome/Scaffold: 4 Start: 6045541 End: 6047930 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 33 | 350 | 0 |
VGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQAWLQQRLQPHISKTRITSIVVGNEIFKTND HVLIASLLPAMKSVYAALTNLGLEKQVAVTSAHSLDILQTSYPPSSGTFKEEFIQYLQPILDFHSQIKSPFLINAYPFFAYKDSPKEVPLEYVLFQPNQG MVDPNTSLHYDNMLFAQVDALYSAIKTLGHTDIEVRISETGWPSKGDESEVGASPENAALYNGNLLKLIQQRKGTPAKQSVPIDVYVFALFNENLKPGPV SERNYGLFYPDGKPVYNV |
Full Sequence |
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Protein Sequence Length: 395 Download |
MASHSSLSFF FRVLLLLFFL TTLSERVKGQ GGVGINYGQI ANNLPSPARV AVLLRSLNIT 60 RVKLYDADPN VLFSFSNSQV DFMIGLGNEY LQNMSTDPTK AQAWLQQRLQ PHISKTRITS 120 IVVGNEIFKT NDHVLIASLL PAMKSVYAAL TNLGLEKQVA VTSAHSLDIL QTSYPPSSGT 180 FKEEFIQYLQ PILDFHSQIK SPFLINAYPF FAYKDSPKEV PLEYVLFQPN QGMVDPNTSL 240 HYDNMLFAQV DALYSAIKTL GHTDIEVRIS ETGWPSKGDE SEVGASPENA ALYNGNLLKL 300 IQQRKGTPAK QSVPIDVYVF ALFNENLKPG PVSERNYGLF YPDGKPVYNV GMQGYLPDII 360 YSSKATSTKI LNMWRAVMGL AVAWLMILSI WATR* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 1.0e-6 | 25 | 343 | 332 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 8.0e-96 | 33 | 350 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001031432.1 | 0 | 83 | 387 | 1 | 305 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_565652.1 | 0 | 24 | 387 | 21 | 383 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | NP_973548.1 | 0 | 24 | 370 | 21 | 366 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002328249.1 | 0 | 26 | 370 | 23 | 365 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523810.1 | 0 | 26 | 365 | 7 | 344 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 33 | 350 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 33 | 350 | 2 | 313 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |