| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10023397m |
| Family | GH17 |
| Protein Properties | Length: 389 Molecular Weight: 43121.6 Isoelectric Point: 8.9977 |
| Chromosome | Chromosome/Scaffold: 4 Start: 4518978 End: 4521038 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 35 | 353 | 0 |
| GINYGRIADNIPSPDKVVLLLKQAKIRNVRIYDADHTVLEAFSGTGLDLVIGLPNGFLKEMSSNSDHAFTWVKDNVQSFLPKTRIRGIAIGNEVLGGGDS ELSGALLGAAKNVYNALKKMNLEETVQITTAHSQAVFADSYPPSSCVFKENVVQFMKPLLEFFHQIGSPFCLNAYPFLAYTYNPKEIDINYALFKPTEGI YDPKTDLHYDNMLDAQIDAAYMALQNAGFKKMEVMITETGWASKGDSDEPAATPENARTYNYNLRKRLAKKKGTPLRPKMVLKAYIFALFNENSKPGKSS ETHFGLFKPDGTISYDIGF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 389 Download |
| MRSSKSLLLN FFLFVFFINL IEFRVEGGAF VGTYGINYGR IADNIPSPDK VVLLLKQAKI 60 RNVRIYDADH TVLEAFSGTG LDLVIGLPNG FLKEMSSNSD HAFTWVKDNV QSFLPKTRIR 120 GIAIGNEVLG GGDSELSGAL LGAAKNVYNA LKKMNLEETV QITTAHSQAV FADSYPPSSC 180 VFKENVVQFM KPLLEFFHQI GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD 240 LHYDNMLDAQ IDAAYMALQN AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK 300 RLAKKKGTPL RPKMVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNSLKSDA 360 TKSLISSSKA ARYYAALVIF VSIVLLMI* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| COG5309 | COG5309 | 0.0008 | 258 | 344 | 90 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] |
| pfam00332 | Glyco_hydro_17 | 2.0e-99 | 35 | 353 | 319 | + Glycosyl hydrolases family 17. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM67102.1 | 0 | 1 | 388 | 1 | 387 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
| DDBJ | BAC43250.1 | 0 | 95 | 388 | 1 | 294 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
| RefSeq | NP_565627.1 | 0 | 21 | 388 | 22 | 388 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | NP_850082.1 | 0 | 95 | 388 | 1 | 294 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002308978.1 | 0 | 29 | 360 | 4 | 335 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 35 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3f55_C | 0 | 35 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3f55_B | 0 | 35 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3f55_A | 0 | 35 | 354 | 3 | 316 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 3em5_D | 0 | 35 | 354 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
