| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10023545m |
| Family | GT31 |
| Protein Properties | Length: 348 Molecular Weight: 39190.4 Isoelectric Point: 8.0901 |
| Chromosome | Chromosome/Scaffold: 4 Start: 2283674 End: 2286248 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 135 | 327 | 0 |
| RRNSFRRSWMPQGDVLTKLEERGIVVRFVIGRSPNRGDSLDRKIDEENQAKKDFLILENHEEAQEELSKKVKFFFSAAVQNWDAEFYIKVDDSIDLDLEG LISLLESRRGQDNAYIGCMKSGQVVSEKGDQWYEPEWWKFGDEKSYFRHAGGSLLILSKNLAQYININSGSLKTYAFDDTSIGSWMIGVQATY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 348 Download |
| MESLPTTTAP SKSERRGRSS KSSQSSSKSS VIMAFFSCVA WLYVAGRLWQ DAENRVVLSD 60 ILKMSYDQKP KVLTVDDKLM VLGCKDLERR IVETEMELSL AKSQGYLKNS KSGSSSGKKF 120 LAVIGVYSGF GSHVRRNSFR RSWMPQGDVL TKLEERGIVV RFVIGRSPNR GDSLDRKIDE 180 ENQAKKDFLI LENHEEAQEE LSKKVKFFFS AAVQNWDAEF YIKVDDSIDL DLEGLISLLE 240 SRRGQDNAYI GCMKSGQVVS EKGDQWYEPE WWKFGDEKSY FRHAGGSLLI LSKNLAQYIN 300 INSGSLKTYA FDDTSIGSWM IGVQATYIDD NRLCCSSIRQ DKVCSVA* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13334 | DUF4094 | 2.0e-14 | 31 | 104 | 86 | + Domain of unknown function (DUF4094). This domain is found in plant proteins that often carry a galactosyltransferase domain, pfam01762, at their C-terminus. | ||
| pfam01762 | Galactosyl_T | 2.0e-33 | 135 | 330 | 202 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| PLN03193 | PLN03193 | 1.0e-74 | 87 | 337 | 262 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD23661.1 | 0 | 1 | 340 | 1 | 329 | unknown protein [Arabidopsis thaliana] |
| RefSeq | NP_180102.3 | 0 | 1 | 347 | 1 | 346 | transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] |
| RefSeq | NP_194939.1 | 0 | 1 | 347 | 1 | 345 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002285482.1 | 0 | 13 | 347 | 4 | 339 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324311.1 | 0 | 3 | 347 | 4 | 345 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GR459857 | 262 | 87 | 348 | 0 |
| BU635948 | 229 | 120 | 348 | 0 |
| CV288989 | 280 | 31 | 310 | 0 |
| EH732604 | 264 | 87 | 348 | 0 |
| ES824199 | 259 | 56 | 312 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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