CAZyme Information

Basic Information
SpeciesCapsella rubella
Cazyme IDCarubv10023563m
FamilyGT2
Protein PropertiesLength: 343 Molecular Weight: 38948.3 Isoelectric Point: 9.1015
ChromosomeChromosome/Scaffold: 4 Start: 11622182 End: 11625163
DescriptionNucleotide-diphospho-sugar transferases superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT2692622.4e-33
  SLIVPAYNEEQRLPAALEETMDYLQDRASRDKSFSFEVVIVDDGSVDGTKRVAFDFVRKHTVDNIRVIPLGKNQGKGEAIRKGMMHSRGQLLLMLDADGA
  TKVTDLEKLESQILAVAREEYSIRNPASKEMDFRIGDIQVSAFGSRAHLEEKALATRKWYRNFLMKGFHLVVLLAAGPGIRDTQCGFKMFTRAA
Full Sequence
Protein Sequence     Length: 343     Download
MEFLVTVAEF GLSLVLIVFF GFLSVVVFEA WRRRHSNVSV ETVTTLEDPK SLKPVPCPHI    60
IDPAEKYLSL IVPAYNEEQR LPAALEETMD YLQDRASRDK SFSFEVVIVD DGSVDGTKRV    120
AFDFVRKHTV DNIRVIPLGK NQGKGEAIRK GMMHSRGQLL LMLDADGATK VTDLEKLESQ    180
ILAVAREEYS IRNPASKEMD FRIGDIQVSA FGSRAHLEEK ALATRKWYRN FLMKGFHLVV    240
LLAAGPGIRD TQCGFKMFTR AAARRLFTNV HLKRWCFDVE LVYLCKRFNI PMVEISVKWS    300
EIPGSKVNML SIPNMLWELA LMSVGYRTGM WKIHQARDTQ TT* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06442DPM1_like1.0e-1870295226+
pfam00535Glycos_transf_23.0e-2369267199+
cd04179DPM_DPG-synthase_like2.0e-4970285216+
PTZ00260PTZ002603.0e-9515333325+
cd04188DPG_synthase6.0e-10770306237+
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqNP_181493.103233532335glycosyl transferase family 2 protein [Arabidopsis thaliana]
RefSeqXP_002283615.103033330334PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002312095.103033330333predicted protein [Populus trichocarpa]
RefSeqXP_002315224.103133331333predicted protein [Populus trichocarpa]
RefSeqXP_002530857.103233332333Dolichyl-phosphate beta-glucosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3l7m_D0.0000868166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7m_C0.0000868166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7m_B0.0000868166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7m_A0.0000868166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
PDB3l7l_D0.0000868166493A Chain A, Structure Of The Wall Teichoic Acid Polymerase Tagf, H548a
Transmembrane Domains
StartEnd
527
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
EX05076230523050
DV712496311143240
DV704377296143090
FY43374724512450
EH688859273623340
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_011_00165.2Aquca_011_00165.3Aquca_011_00165.4Aquca_011_00165.1
Arabidopsis lyrata482983
Arabidopsis thalianaAT2G39630.2AT2G39630.1
Brachypodium distachyonBradi1g03660.1
Brassica rapaBra005029Bra000139
Carica papayaevm.model.supercontig_1.403
Chlamydomonas reinhardtiiCre16.g652850.t1.2
Citrus clementinaCiclev10032053m
Citrus sinensisorange1.1g027065morange1.1g019818morange1.1g023346m
Cucumis sativusCucsa.010820.1Cucsa.165370.1Cucsa.165370.2Cucsa.165370.3
Eucalyptus grandisEucgr.G02933.1Eucgr.G02933.2Eucgr.G02933.3
Fragaria vescamrna26609.1-v1.0-hybrid
Glycine maxGlyma02g10150.1Glyma18g52810.2Glyma18g52810.1Glyma02g10150.3Glyma02g10150.2
Gossypium raimondiiGorai.011G260700.2Gorai.009G319400.2Gorai.009G319400.4Gorai.011G260700.3Gorai.011G260700.1
Gorai.009G319400.1Gorai.009G319400.3
Linum usitatissimumLus10005164Lus10001691Lus10023414Lus10040296
Malus domesticaMDP0000274007MDP0000272852
Manihot esculentacassava4.1_011328m
Medicago truncatulaMedtr7g026260.2Medtr7g026260.1
Mimulus guttatusmgv1a025143m
Oryza sativaLOC_Os03g60700.1LOC_Os03g60700.2
Panicum virgatumPavirv00060983mPavirv00063183m
Physcomitrella patensPp1s49_46V6.1Pp1s14_205V6.2Pp1s14_205V6.1Pp1s96_201V6.1
Phaseolus vulgarisPhvul.008G010800.1Phvul.008G010800.2
Picea abiesMA_10347707g0010MA_10428813g0010MA_159008g0490MA_158860g0090
Populus trichocarpaPotri.010G204000.4Potri.010G204000.2Potri.010G204000.1Potri.008G055700.1Potri.010G204000.3
Potri.008G055700.2
Prunus persicappa008313m
Ricinus communis30003.m000334
Setaria italicaSi036396m
Selaginella moellendorffii73379414988101926
Sorghum bicolorSb01g003140.1
Thellungiella halophilaThhalv10016901m
Vitis viniferaGSVIVT01016551001
Volvox carteriVocar20012273m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny