y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10024512m |
Family | CE8 |
Protein Properties | Length: 596 Molecular Weight: 64768.2 Isoelectric Point: 9.4243 |
Chromosome | Chromosome/Scaffold: 4 Start: 14646955 End: 14648859 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 284 | 578 | 0 |
FVVAKDGSGQFKTVQQAVNACPDKNPGRCIIHIKAGIYKEQVIIPKKKNNIFMFGDGARKTVITYNRSVKLTPGTTTSLSGTVQVESEGFMAKWIGFKNT AGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCR IVPDKKLAAERLTVPSYLGRPWKKFSTTVIMNTEMGDLIRPEGWKIWDGESFHKSCRYVEFNNRGPGAITNRRVNWAKIAKSAAEVNDYTVANWL |
Full Sequence |
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Protein Sequence Length: 596 Download |
MIGKVVVSVA SILLLVGVAI GVVAFINKNG DSNLSPQMKA VQGICQATAD KASCVKTLEP 60 VKSDDPNKLI KAFMLATKDA ITKSSNFTGK TEGNMGSSIS PNNKAVLDYC KRVFLYALED 120 LSTIVEEMGE DLNQIGSKID QLKQWLTGVY NYQTDCLDDI EEEDLRKTIG EGIASSKILT 180 SNAIDIFHTV VSAMAKLNIK VDEFKNMTGG LFTPSNKGDA PVNKGTPPVA DESPVADPDG 240 PARRLLEDMD ETGTPTWVSG GDRKLMAKAG RGGNDGAARI RETFVVAKDG SGQFKTVQQA 300 VNACPDKNPG RCIIHIKAGI YKEQVIIPKK KNNIFMFGDG ARKTVITYNR SVKLTPGTTT 360 SLSGTVQVES EGFMAKWIGF KNTAGPMGHQ AVAIRVNGDR AVIFNCRFDG YQDTLYVNNG 420 RQFYRNIVVS GTVDFIFGKS ATVIQNSLIV VRKGNKGQFN TVTADGNEKG LAMKIGIVLQ 480 NCRIVPDKKL AAERLTVPSY LGRPWKKFST TVIMNTEMGD LIRPEGWKIW DGESFHKSCR 540 YVEFNNRGPG AITNRRVNWA KIAKSAAEVN DYTVANWLGP INWIQEANVP VTLGL* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02990 | PLN02990 | 1.0e-104 | 39 | 592 | 570 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 3.0e-105 | 28 | 595 | 572 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 1.0e-134 | 39 | 595 | 574 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 5.0e-136 | 285 | 579 | 297 | + Pectinesterase. | ||
PLN02197 | PLN02197 | 0 | 1 | 595 | 598 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAV91508.1 | 0 | 28 | 595 | 28 | 595 | VANGUARD 1 [Arabidopsis thaliana] |
GenBank | AAV91509.1 | 0 | 28 | 595 | 28 | 588 | VGD1-like protein 1 [Arabidopsis thaliana] |
EMBL | CAB58974.1 | 0 | 28 | 595 | 28 | 595 | pectin methylesterase [Arabidopsis thaliana] |
RefSeq | NP_182226.1 | 0 | 28 | 595 | 28 | 588 | VGDH1; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_182227.1 | 0 | 28 | 595 | 28 | 595 | VGD1 (VANGUARD1); enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 285 | 595 | 10 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 285 | 595 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 9e-20 | 285 | 577 | 7 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 9e-20 | 285 | 577 | 7 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 9e-20 | 285 | 577 | 7 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |