Basic Information | |
---|---|
Species | Capsella rubella |
Cazyme ID | Carubv10024513m |
Family | CE8 |
Protein Properties | Length: 610 Molecular Weight: 67700.8 Isoelectric Point: 7.9599 |
Chromosome | Chromosome/Scaffold: 4 Start: 3414316 End: 3416435 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 297 | 592 | 0 |
ATVAKDGSGNFTTINDALNAMPEKYEGRYIIYVKQGVYDETVIVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAG PEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAA NEDLKPVMAEYKSYLGRPWKNYSRTIVMESTIEDVIDPVGWLRWQETDFAIDTLYYAEYKNKGPSGDTASRVKWPGYKVINKEEALNYTVGPFLQG |
Full Sequence |
---|
Protein Sequence Length: 610 Download |
MAFQDFDKIQ ERVNANRKRK FRKRIIVGSV SLLVVVAAIV GGAFAYVAYE KRNEQQEAKN 60 HNKSGSGNNV KDGEKKSQSP PSPSQKPPVS PEQLLKPVQD DKIIETLCSS SLYTQECEKT 120 LKNSTEKGFA LANPTTFLTS AIEAINGDLD RVLEQFLSLK TENQDDIDAI AQCKLLVEEA 180 KEETVASLKK INSTEVSSFA NVVPDLDSWL SAVMSYQETC LDGFEEGTLK SEVKKSVNSS 240 QVLTSNSLAM IKSFDEHLSP VIKAASRLLL DEIPSWVSND DRRMLRAVDV KALKPNATVA 300 KDGSGNFTTI NDALNAMPEK YEGRYIIYVK QGVYDETVIV DKKKANLTMV GDGSQKTIVT 360 GNKSHAKKIR TFLTATFVAQ GEGFMAQSMG FRNTAGPEGH QAVAIRVQSD RSIFLNCRFE 420 GYQDTLYAYT HRQYYRSCVI VGTIDFIFGD AAAIFQNCNI FIRKGLPGQK NTVTAQGRVD 480 KFQTTGFVVH NCKIAANEDL KPVMAEYKSY LGRPWKNYSR TIVMESTIED VIDPVGWLRW 540 QETDFAIDTL YYAEYKNKGP SGDTASRVKW PGYKVINKEE ALNYTVGPFL QGDWINASGS 600 PVKLGLYDA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 1.0e-149 | 104 | 606 | 525 | + pectinesterase | ||
PLN02201 | PLN02201 | 5.0e-151 | 168 | 607 | 453 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 3.0e-154 | 104 | 606 | 511 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02745 | PLN02745 | 0 | 1 | 607 | 621 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 296 | 593 | 299 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAC14494.1 | 0 | 115 | 609 | 2 | 496 | putative pectinesterase [Arabidopsis thaliana] |
RefSeq | NP_195049.1 | 0 | 1 | 609 | 1 | 609 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_850077.1 | 0 | 1 | 609 | 1 | 614 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q7Y201 | 0 | 1 | 609 | 1 | 614 | PME13_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 13; Includes: RecName: Full=Pectinesterase inhibitor 13; AltName: Full=Pectin methylesterase inhibitor 13; Includes: RecName: Full=Pectinesterase 13; Short=PE 13; AltName: Full=Pectin methylesterase 13; Short=AtPME13 |
RefSeq | XP_002324181.1 | 0 | 1 | 607 | 1 | 593 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 293 | 606 | 5 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 296 | 608 | 4 | 317 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 4e-22 | 296 | 594 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 4e-22 | 296 | 594 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 4e-22 | 296 | 594 | 5 | 337 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |