Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025243m |
Family | CBM43 |
Protein Properties | Length: 120 Molecular Weight: 13157 Isoelectric Point: 7.1409 |
Chromosome | Chromosome/Scaffold: 4 Start: 13308595 End: 13309234 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 33 | 114 | 6.6e-30 |
WCVAKPGTSTEQLLNNLNYACSKIDCHIVSKGGACYSPDNLYNQASVAMNLYYQAEGRHFWNCNFEGSGLIVITDPSDGCCK |
Full Sequence |
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Protein Sequence Length: 120 Download |
MAKAYICLSF IILLYISSAG SVMRVNAQSQ GDWCVAKPGT STEQLLNNLN YACSKIDCHI 60 VSKGGACYSP DNLYNQASVA MNLYYQAEGR HFWNCNFEGS GLIVITDPSD GCCKYEFRK* 120 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-15 | 33 | 101 | 75 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-31 | 33 | 115 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAB64039.1 | 0 | 1 | 110 | 1 | 112 | putative beta-1,3-glucanase, C terminal fragment [Arabidopsis thaliana] |
GenBank | AAT41831.1 | 0 | 6 | 119 | 5 | 120 | At2g43670 [Arabidopsis thaliana] |
DDBJ | BAB02616.1 | 0 | 3 | 110 | 5 | 113 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_181895.2 | 0 | 1 | 119 | 1 | 121 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_973680.1 | 1.4013e-45 | 1 | 119 | 1 | 123 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 7e-25 | 28 | 116 | 8 | 97 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |