y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025315m |
Family | AA1 |
Protein Properties | Length: 541 Molecular Weight: 61065.1 Isoelectric Point: 10.1218 |
Chromosome | Chromosome/Scaffold: 4 Start: 1201768 End: 1204073 |
Description | SKU5 similar 16 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 29 | 499 | 0 |
YLYFTWTVTYGTRSPLGVPQQIILINGQFPGPAIEGVTNNNIVVNVINKLDEPFLITWNGIKQRRMSWQDGVLGTNCPIQPNSNWTYHFQLKDQIGTYVY FASTSMHRASGAFGALNVYQRSVIFVPYPKPDADFTLLVSDWYKMGHKELRRSLDSGRALPLPDGLLINGASKGLVFTGQHGKIYRFRISNVGISTSINF RIQGHMMTLVEVEGSHTLQEVYESLDIHVGQSVTVLVTLKAPVKDYFVVASTRFTKPVLTTTGILSYQGSKIRPSHPLPIGPTYHIHWSMKQARSIRLNL TANAARPNPQGSFHYGTIPINRTFVLANGRATINGKLRYTVNRVSYVNPTTPLKLADWFNIPGVFNFRTMMNIPTPGPSILGTSVFDVALHEYVEFVFQN NERSIQSWHLDGTSAYVVGYGPGTWNLAKRRGYNLVDAVSRHTFQVYPMSWTSVLVSLDNKGMWNLRSQIW |
Full Sequence |
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Protein Sequence Length: 541 Download |
MKQKNLLLVG FLLAYCFSSV FVVNAEDPYL YFTWTVTYGT RSPLGVPQQI ILINGQFPGP 60 AIEGVTNNNI VVNVINKLDE PFLITWNGIK QRRMSWQDGV LGTNCPIQPN SNWTYHFQLK 120 DQIGTYVYFA STSMHRASGA FGALNVYQRS VIFVPYPKPD ADFTLLVSDW YKMGHKELRR 180 SLDSGRALPL PDGLLINGAS KGLVFTGQHG KIYRFRISNV GISTSINFRI QGHMMTLVEV 240 EGSHTLQEVY ESLDIHVGQS VTVLVTLKAP VKDYFVVAST RFTKPVLTTT GILSYQGSKI 300 RPSHPLPIGP TYHIHWSMKQ ARSIRLNLTA NAARPNPQGS FHYGTIPINR TFVLANGRAT 360 INGKLRYTVN RVSYVNPTTP LKLADWFNIP GVFNFRTMMN IPTPGPSILG TSVFDVALHE 420 YVEFVFQNNE RSIQSWHLDG TSAYVVGYGP GTWNLAKRRG YNLVDAVSRH TFQVYPMSWT 480 SVLVSLDNKG MWNLRSQIWS RRYLGQELYV RVWNDERSLY TEAEPPINAL FCGKAKRPRF 540 * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02835 | PLN02835 | 0 | 6 | 535 | 530 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 9 | 536 | 539 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 1 | 535 | 535 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 18 | 535 | 522 | + oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 11 | 534 | 544 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18561.1 | 0 | 16 | 538 | 80 | 601 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195433.1 | 0 | 1 | 538 | 1 | 540 | sks15 (SKU5 Similar 15); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | NP_565554.1 | 0 | 1 | 540 | 1 | 540 | sks16 (SKU5 Similar 16); copper ion binding / pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002310164.1 | 0 | 1 | 538 | 1 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522339.1 | 0 | 1 | 538 | 1 | 540 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 537 | 5 | 543 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1asq_A | 0 | 31 | 537 | 5 | 543 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1asp_B | 0 | 31 | 537 | 5 | 543 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1asp_A | 0 | 31 | 537 | 5 | 543 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1aso_B | 0 | 31 | 537 | 5 | 543 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |