Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025326m |
Family | GT47 |
Protein Properties | Length: 467 Molecular Weight: 54376.5 Isoelectric Point: 9.484 |
Chromosome | Chromosome/Scaffold: 4 Start: 8688462 End: 8689862 |
Description | galactosyltransferase 13 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 66 | 413 | 0 |
CAGRYVYMHNLPSRFNDDLIKNCEAYIELRNKCKYLVNSGFGPRILEDDYNHTTQVLTIETGSWYSTNQFMLEVIFREKMRHYECLTNDSSLSSAVFVPF YAGFDVRRFWGYSVKLRDELGEDLAQWLRKRSEWKKMNGRDHFFVTGRVGRDFRRATDQDSDWGNKLMRLPEFENITMLSIETNSWSNEFAVPYPTCFHP KSRTEVKRWQRQVRMTKRRHLYSFAGAKRPQIKVSIRGEIIRQCLASQERCKFLDCNNQSRDCSDPVKVMEVFRDSVFCVQPPGDTPTRRSTFDSILAGC IPVLFTPDSVYNQYNWYFPKDHTKYSVYIPEKDVKNGKVSIEKLLASI |
Full Sequence |
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Protein Sequence Length: 467 Download |
MDKFNPKMKK IARKRAPNVL IDILPTPIFS MLFLLHINQI ATYLFLSDKE TLNISVNTKQ 60 GGADTCAGRY VYMHNLPSRF NDDLIKNCEA YIELRNKCKY LVNSGFGPRI LEDDYNHTTQ 120 VLTIETGSWY STNQFMLEVI FREKMRHYEC LTNDSSLSSA VFVPFYAGFD VRRFWGYSVK 180 LRDELGEDLA QWLRKRSEWK KMNGRDHFFV TGRVGRDFRR ATDQDSDWGN KLMRLPEFEN 240 ITMLSIETNS WSNEFAVPYP TCFHPKSRTE VKRWQRQVRM TKRRHLYSFA GAKRPQIKVS 300 IRGEIIRQCL ASQERCKFLD CNNQSRDCSD PVKVMEVFRD SVFCVQPPGD TPTRRSTFDS 360 ILAGCIPVLF TPDSVYNQYN WYFPKDHTKY SVYIPEKDVK NGKVSIEKLL ASISEGRILK 420 MRNEVKKIIP KIIYTKPGEV GPEKIEDAFE IAVARVLDRV QDMPPN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-63 | 66 | 413 | 362 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180833.1 | 0 | 1 | 460 | 1 | 460 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | NP_180834.1 | 0 | 14 | 460 | 3 | 474 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002321098.1 | 0 | 16 | 460 | 7 | 438 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518606.1 | 0 | 63 | 461 | 73 | 461 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |
RefSeq | XP_002518609.1 | 0 | 63 | 461 | 73 | 464 | Xyloglucan galactosyltransferase KATAMARI1, putative [Ricinus communis] |