Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025481m |
Family | AA2 |
Protein Properties | Length: 333 Molecular Weight: 35864.9 Isoelectric Point: 4.8998 |
Chromosome | Chromosome/Scaffold: 4 Start: 2031299 End: 2032626 |
Description | Peroxidase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 58 | 316 | 0 |
ASSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPGNASLGGFAVIENVKNVLEIFCPGTVSCADLLVLAARDAVEALGGPVVPIPTGRRDGTVS MAANVRPNIIDTDFTVDKMINIFSSKGLSIQDLVVLSGAHTIGAAHCNTFNSRFKLGPKGNLELIDSSLDNSYAQTLLNKCSSSLDPTTTVVDNDPETSS TFDNQYYKNLIAHKGLFQTDSALMEDDRTRKIVEILANDQESFFERWTESFMKMSVMGV |
Full Sequence |
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Protein Sequence Length: 333 Download |
MALQFSSCRP KPTLFFILLC LPLLLLVSSS LADLSFNFYA GSCPGAELIV RNTVRSAASS 60 DPSVLGKLLR LIFHDCFVQG CDGSVLIRGN GTERSDPGNA SLGGFAVIEN VKNVLEIFCP 120 GTVSCADLLV LAARDAVEAL GGPVVPIPTG RRDGTVSMAA NVRPNIIDTD FTVDKMINIF 180 SSKGLSIQDL VVLSGAHTIG AAHCNTFNSR FKLGPKGNLE LIDSSLDNSY AQTLLNKCSS 240 SLDPTTTVVD NDPETSSTFD NQYYKNLIAH KGLFQTDSAL MEDDRTRKIV EILANDQESF 300 FERWTESFMK MSVMGVRVGE EGEIRRSCSA VN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00141 | peroxidase | 7.0e-6 | 265 | 296 | 32 | + Peroxidase. | ||
cd00691 | ascorbate_peroxidase | 1.0e-24 | 68 | 317 | 269 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
pfam00141 | peroxidase | 4.0e-50 | 50 | 199 | 151 | + Peroxidase. | ||
PLN03030 | PLN03030 | 6.0e-63 | 38 | 332 | 302 | + cationic peroxidase; Provisional | ||
cd00693 | secretory_peroxidase | 5.0e-132 | 37 | 331 | 298 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180053.1 | 0 | 1 | 332 | 1 | 329 | peroxidase, putative [Arabidopsis thaliana] |
RefSeq | NP_194904.1 | 0 | 13 | 332 | 11 | 326 | peroxidase, putative [Arabidopsis thaliana] |
RefSeq | XP_002285587.1 | 0 | 17 | 332 | 14 | 328 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
RefSeq | XP_002309694.1 | 0 | 7 | 332 | 9 | 331 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324930.1 | 0 | 7 | 329 | 9 | 330 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3hdl_A | 0 | 33 | 332 | 1 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
PDB | 1sch_B | 0 | 33 | 332 | 1 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 33 | 332 | 1 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1bgp_A | 0 | 34 | 332 | 9 | 305 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |
PDB | 1qo4_A | 0 | 34 | 332 | 3 | 304 | A Chain A, Crystal Structure Of Barley Grain Peroxidase 1 |