| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10025638m |
| Family | AA1 |
| Protein Properties | Length: 570 Molecular Weight: 63790 Isoelectric Point: 8.4888 |
| Chromosome | Chromosome/Scaffold: 4 Start: 14440326 End: 14442528 |
| Description | laccase 6 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 29 | 560 | 0 |
| AATRFYQFKVQTKTLTRLCQTKEIVTVNGKFPGPTISAQEDDRIVVEVINMTPYNTTIHWHGIKQKLSCWYDGPSYITQCPIQSGQSFTYNFTVAQQKGT FLWHAHFSWLRATVYGPLIVYPKSSVPYPFKKPFNEHTILLGEYWLKNVVELEQNVLESGGPPPPADAFTINGQPGPNYNCSSNDVYKIKIMPRKTYLLR LINAGINMETFFTIANHKLTIVEVDGEYTKPFATERVMLVPGQTMNVLVTADQAVGRYYIAMGPYESAKNVKFQNISATANFQYIGALPNSVTVPAKLPM FNDNIAVKTVMDGLRSLNAVDVPRNVDAHLFITIGINVNKCNSENPNNKCQGPRKGRLAASMNNISFVEPKVSILEAYYKQLEGYFTLDFPTTPEKTYDF VNGAPNDIANDTQAANGTRAIVFEYGSRIQIIFQNTGTLTTENHPIHLHGHSFYVIGYGTGNYDQQTAQFNLEDPPYLNTIGVPVGGWAAIRFVANNPGL WLLHCHFDIHQTWGMSTMFIVKNGKKVQESLP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 570 Download |
| MTNSAVPSLF QLSFFLFTLQ VMIVSRISAA TRFYQFKVQT KTLTRLCQTK EIVTVNGKFP 60 GPTISAQEDD RIVVEVINMT PYNTTIHWHG IKQKLSCWYD GPSYITQCPI QSGQSFTYNF 120 TVAQQKGTFL WHAHFSWLRA TVYGPLIVYP KSSVPYPFKK PFNEHTILLG EYWLKNVVEL 180 EQNVLESGGP PPPADAFTIN GQPGPNYNCS SNDVYKIKIM PRKTYLLRLI NAGINMETFF 240 TIANHKLTIV EVDGEYTKPF ATERVMLVPG QTMNVLVTAD QAVGRYYIAM GPYESAKNVK 300 FQNISATANF QYIGALPNSV TVPAKLPMFN DNIAVKTVMD GLRSLNAVDV PRNVDAHLFI 360 TIGINVNKCN SENPNNKCQG PRKGRLAASM NNISFVEPKV SILEAYYKQL EGYFTLDFPT 420 TPEKTYDFVN GAPNDIANDT QAANGTRAIV FEYGSRIQII FQNTGTLTTE NHPIHLHGHS 480 FYVIGYGTGN YDQQTAQFNL EDPPYLNTIG VPVGGWAAIR FVANNPGLWL LHCHFDIHQT 540 WGMSTMFIVK NGKKVQESLP HPPTDLPKC* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 5.0e-70 | 28 | 548 | 563 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-84 | 21 | 547 | 564 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 5.0e-87 | 31 | 547 | 563 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 29 | 569 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN75876.1 | 0 | 30 | 569 | 32 | 571 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_182180.1 | 0 | 1 | 569 | 1 | 569 | LAC6 (laccase 6); laccase [Arabidopsis thaliana] |
| RefSeq | XP_002264410.1 | 0 | 30 | 569 | 32 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002320207.1 | 0 | 42 | 569 | 2 | 529 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523314.1 | 0 | 30 | 569 | 33 | 572 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 32 | 547 | 4 | 521 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 1asq_A | 0 | 32 | 547 | 4 | 521 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 1asp_B | 0 | 32 | 547 | 4 | 521 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 1asp_A | 0 | 32 | 547 | 4 | 521 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
| PDB | 1aso_B | 0 | 32 | 547 | 4 | 521 | B Chain B, Crystal Structure Of Plant Cell Wall Invertase In Complex With A Specific Protein Inhibitor |
