| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10025826m |
| Family | GH116 |
| Protein Properties | Length: 955 Molecular Weight: 106552 Isoelectric Point: 5.9168 |
| Chromosome | Chromosome/Scaffold: 8 Start: 6207037 End: 6212074 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 527 | 889 | 0 |
| GHFLYLEGIEYRMWNTYDVHFYASFALVMLFPKLELSIQRDFAAAVMLHDPTKVKTLSEGQWVQRKVLGAVPHDLGINDPWFEVNGYNLHNTDRWKDLNP KFVLQVYRDVVATGDKKFAVAVWPSVYVAMAYMAQFDKDGDGMIENEGFPDQTYDTWSASGVSAYCGGLWVAALQAASALAHVVGDKNSQDYFWSKFQKA KVVYEKKLWNGSYFNYDTSGSQYSSSIQADQLAGQWYARASGLFPIVDEDKARTALEKVYNFNVMKIKDGKRGAVNGMHPNGKVDTASMQSREIWSGVTY ALSATMIQEGLVEMAFQTASGVYEAAWSETGLGYSFQTPEAWNTNDEYRSLTYMRPLGIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 955 Download |
| MFEEKIMDSA EDDKSWNPSD TKVDPAVPSS LTWQRKINSD GKAPREFNLT PKEIFQLAPV 60 GIRLWFLCRE EAAKGRFAAI DPFCKHTVTS SHGVPLGGIG AGSIGRSFKG EFQRWQLFPP 120 KCEDEPVLAN QFSAFVSRAN GKKYSSVLCP KNPKLGKQES ESGIGSWDWN LKGDKSTYHA 180 LYPKSWTMYE GEPDPELRIV CRQVSPFIPH NYKESSFPVS VFTFTLHNLG NTTADVTLLF 240 TWANSVGGDS EFSGGHYNSK IMMKDGVQGV LLHHKTANEL PSLSYAISAQ STDGVNVSAC 300 PFFIVSGKQN GTTAKDMWQV IKENGSFDHF EASEASMQSE HGSSIGAAVA ASATVPPGES 360 RIVTFSLAWD CPEVQFPSGK IYSRRYTKFY GTDGDAAAQI AYDAILQHSQ WESWIEAWQR 420 PILEDKRLPE WYPITLFNEL YYLNSGGTLW TDGSSPVHSL AGVREKKFSL DKSQLGLKND 480 IDVPRQNDTA ISVLEKMAST LEQLHASTAS NSAFGTKLLE EGEENIGHFL YLEGIEYRMW 540 NTYDVHFYAS FALVMLFPKL ELSIQRDFAA AVMLHDPTKV KTLSEGQWVQ RKVLGAVPHD 600 LGINDPWFEV NGYNLHNTDR WKDLNPKFVL QVYRDVVATG DKKFAVAVWP SVYVAMAYMA 660 QFDKDGDGMI ENEGFPDQTY DTWSASGVSA YCGGLWVAAL QAASALAHVV GDKNSQDYFW 720 SKFQKAKVVY EKKLWNGSYF NYDTSGSQYS SSIQADQLAG QWYARASGLF PIVDEDKART 780 ALEKVYNFNV MKIKDGKRGA VNGMHPNGKV DTASMQSREI WSGVTYALSA TMIQEGLVEM 840 AFQTASGVYE AAWSETGLGY SFQTPEAWNT NDEYRSLTYM RPLGIWAMQW ALTKTSKEQK 900 QIGLEPEQEP EASSLMKHDM GFSRVSRLLN LPNEASAKGT LQTLFAYTCR RFMS* 960 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 3.0e-29 | 92 | 452 | 376 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 1.0e-67 | 526 | 896 | 388 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 9.0e-68 | 93 | 414 | 330 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| pfam04685 | DUF608 | 6.0e-165 | 527 | 890 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA97011.1 | 0 | 1 | 954 | 1 | 928 | unnamed protein product [Arabidopsis thaliana] |
| DDBJ | BAE99037.1 | 0 | 1 | 954 | 1 | 957 | hypothetical protein [Arabidopsis thaliana] |
| DDBJ | BAH19567.1 | 0 | 1 | 954 | 1 | 957 | AT5G49900 [Arabidopsis thaliana] |
| RefSeq | NP_199801.2 | 0 | 1 | 954 | 1 | 957 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002528846.1 | 0 | 18 | 952 | 17 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DK488620 | 280 | 325 | 603 | 0 |
| DK470483 | 278 | 325 | 601 | 0 |
| DY292040 | 365 | 540 | 901 | 0 |
| JG703027 | 329 | 545 | 873 | 0 |
| DK477296 | 271 | 325 | 594 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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