Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10025920m |
Family | GH3 |
Protein Properties | Length: 777 Molecular Weight: 83576.4 Isoelectric Point: 8.7787 |
Chromosome | Chromosome/Scaffold: 8 Start: 5893158 End: 5897979 |
Description | beta-xylosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 83 | 331 | 0 |
AAVPRLGIGGYEWWSEALHGVSDVGPGARFGGAFPGATSFPQVITTAASFNQSLWEEIGRVVSDEARAMYNGGVAGLTYWSPNVNILRDPRWGRGQETPG EDPVVAGKYAASYVRGLQGTAAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVTQQDLEDTYNVPFRSCVSEGKVASVMCSYNQVNGKPTCADEDLLK NTIRGQWRLNGYIVSDCDSVDVFFNQQHYTNTPEEAAAASIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 777 Download |
MSCNNNGKAF LVGNKVVVIL VFLLCLVRSS ESLRPLFACD PANGLTRTLR FCRVNVPIHV 60 RVQDLIGRLT LQEKIRNLVN NAAAVPRLGI GGYEWWSEAL HGVSDVGPGA RFGGAFPGAT 120 SFPQVITTAA SFNQSLWEEI GRVVSDEARA MYNGGVAGLT YWSPNVNILR DPRWGRGQET 180 PGEDPVVAGK YAASYVRGLQ GTAAGNRLKV AACCKHYTAY DLDNWNGVDR FHFNAKVTQQ 240 DLEDTYNVPF RSCVSEGKVA SVMCSYNQVN GKPTCADEDL LKNTIRGQWR LNGYIVSDCD 300 SVDVFFNQQH YTNTPEEAAA ASIKAGLDLD CGPFLAIFTE GAVKKGLLTE NDINLALANT 360 LTVQMRLGMF DGNLGPYANL GPRDVCTPAH KHLALEAAHQ GIVLLKNSGR SLPLSPRRHR 420 TVAVIGPNSD VTETMIGNYA GKACSYTTPL QGISRYARTL HQAGCAGVAC KGNQGFGAAE 480 AAARQADATV LVMGLDQSIE AETRDRTGLL LPGFQQDLVT RVAQASRGPV ILVLMSGGPI 540 DVTFAKNDPR VAAIIWAGYP GQAGGAAIAN IIFGAANPGG KLPMTWYPQD YVAKVPMTVM 600 AMRASGNYPG RTYRFYKGPV VFPFGFGLSY TTFTHSLAKS PLAQLSVSLS NLNSANAILN 660 SSSHSIKVSH TNCNSFPKMP LHVEVSNTGE FDGTHTVFVF AEPPKNGIKG LGVNKQLVTF 720 EKVHVTAGAK QTVQINVDAC KHLGVVDEYG KRRIPMGEHK LHIGDLKHTI LVQPQL* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-42 | 402 | 632 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 6.0e-53 | 73 | 453 | 386 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 9.0e-62 | 120 | 741 | 670 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam00933 | Glyco_hydro_3 | 7.0e-63 | 73 | 363 | 294 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PLN03080 | PLN03080 | 0 | 29 | 773 | 764 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAS17751.2 | 0 | 1 | 773 | 1 | 764 | beta xylosidase [Fragaria x ananassa] |
DDBJ | BAG28345.1 | 0 | 28 | 755 | 20 | 743 | arabinofuranosidase [Citrus unshiu] |
RefSeq | NP_199747.1 | 0 | 1 | 776 | 1 | 774 | BXL1 (BETA-XYLOSIDASE 1); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002316021.1 | 0 | 31 | 776 | 23 | 763 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002519194.1 | 0 | 34 | 776 | 39 | 777 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 120 | 737 | 91 | 696 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 3u48_A | 0 | 120 | 737 | 91 | 696 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_B | 0 | 120 | 737 | 91 | 696 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 3u4a_A | 0 | 120 | 737 | 91 | 696 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |
PDB | 2x41_A | 8e-40 | 61 | 636 | 3 | 606 | A Chain A, Crystal Structure Of A Putative Alpha-Rhamnosidase From Bacteroides Thetaiotaomicron |