| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10026017m |
| Family | GT31 |
| Protein Properties | Length: 679 Molecular Weight: 77166.5 Isoelectric Point: 8.605 |
| Chromosome | Chromosome/Scaffold: 8 Start: 11455819 End: 11459172 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 444 | 625 | 0 |
| ERMAVRRSWMQHKLVKSSKVVARFFVALHSRKEVNVELKKEAEFFGDIVIVPYMDSYDLVVLKTVAICEYGAHQLAAKFIMKCDDDTFVQVDAVLSEAKR TPADRSLYIGNINYYHKPLRQGKWAVTYEEWPEEDYPPYANGPGYILSNDISRFIVKEFEKHKLRMFKMEDVSVGMWVEQFN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 679 Download |
| MRKPKLSKLE RLEKFDMFVA LSKQRSVQIL MAVGLLYMLL ITFEIPFVFK TGLSSLSQDP 60 LTRPEKLTSQ RDLQERRAPT RPFKSLLYQD SQSEAPGQGL RRTTPILSSL RFDPETFNPS 120 SRDGSVELHK SAKVAWEVGR KLWQDLESGK TLKALEKEKK KKTEEHSSCS LSVSLTGSDL 180 SKRGNLMELP CGLTLGSHIT VVGKPRAAHS EKDPKISMLK EGDEAVKVSQ FKLELQGLKA 240 VEGEEPPRIL HLNPRLKGDW SGKPVIEQNT CYRMQWGSAQ RCEGWRSRDD EETVDGQVKC 300 EKWARDDSIT SKEESSKAAS WWLSRLIGRS KKVTVEWPFP FTVDKLFVLT LSAGLEGYHV 360 SVDGKHVTSF PYRTGFTLED ATGLTINGDI DVHSVFAGSL PTSHPSFAPQ RHLELSSNWQ 420 APSLPDEQVD MFIGILSAGN HFAERMAVRR SWMQHKLVKS SKVVARFFVA LHSRKEVNVE 480 LKKEAEFFGD IVIVPYMDSY DLVVLKTVAI CEYGAHQLAA KFIMKCDDDT FVQVDAVLSE 540 AKRTPADRSL YIGNINYYHK PLRQGKWAVT YEEWPEEDYP PYANGPGYIL SNDISRFIVK 600 EFEKHKLRMF KMEDVSVGMW VEQFNNGTKP VDYLHSLKFC QFGCIENYLT AHYQSPRQMI 660 CLWDKLVLTG KPQCCNMR* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| smart00908 | Gal-bind_lectin | 7.0e-18 | 190 | 395 | 206 | + Galactoside-binding lectin. Animal lectins display a wide variety of architectures. They are classified according to the carbohydrate-recognition domain (CRD) of which there are two main types, S-type and C-type. Galectins (previously S-lectins) bind exclusively beta-galactosides like lactose. They do not require metal ions for activity. Galectins are found predominantly, but not exclusively in mammals. Their function is unclear. They are developmentally regulated and may be involved in differentiation, cellular regulation and tissue construction. | ||
| cd00070 | GLECT | 4.0e-19 | 189 | 396 | 208 | + Galectin/galactose-binding lectin. This domain exclusively binds beta-galactosides, such as lactose, and does not require metal ions for activity. GLECT domains occur as homodimers or tandemly repeated domains. They are developmentally regulated and may be involved in differentiation, cell-cell interaction and cellular regulation. | ||
| pfam01762 | Galactosyl_T | 3.0e-19 | 443 | 622 | 191 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| pfam00337 | Gal-bind_lectin | 8.0e-24 | 185 | 395 | 211 | + Galactoside-binding lectin. This family contains galactoside binding lectins. The family also includes enzymes such as human eosinophil lysophospholipase (EC:3.1.1.5). | ||
| PLN03133 | PLN03133 | 3.0e-120 | 180 | 678 | 509 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAD55296.1 | 0 | 31 | 678 | 1 | 642 | AC008263_27 ESTs gb |
| DDBJ | BAA97209.1 | 0 | 1 | 678 | 1 | 681 | unnamed protein product [Arabidopsis thaliana] |
| RefSeq | NP_001119480.1 | 0 | 1 | 567 | 1 | 570 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | NP_201068.1 | 0 | 1 | 678 | 1 | 681 | galactosyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002511491.1 | 0 | 5 | 678 | 2 | 670 | galactosyltransferase, putative [Ricinus communis] |
