| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10026126m |
| Family | CE8 |
| Protein Properties | Length: 597 Molecular Weight: 65012.1 Isoelectric Point: 6.5085 |
| Chromosome | Chromosome/Scaffold: 8 Start: 12215579 End: 12218287 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 284 | 587 | 0 |
| VTVCKNGGKDCKYKTVQEAVNAAPDTNGTVKFVIRIREGVYEETVRVPFEKRNVVFIGDGMGKTVITGSLNVGQPGMTTFNSATVGVLGDGFMARDLTIE NTAGADARQAVAFRSDSDFSVLENCEFLGNQDTVYAHSLRQFYKQCRIEGNVDFIFGNSAAVFQDCDILIASKHSKLENGANNAITAHGRIDASQSTGFV FSNCSINGTEEYLKEYQANPKGHKNFLGRPWKEFSRTVFVNCNLGSLISPDGWMPWSGDFALKTLYYGEYKNTGPGSDRSNRVPWSSEIPEKHVDVYSVA NFIQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 597 Download |
| MDSPKLPYSL SASSSAPFAS SVVKPHQKKL LTRNCILIII ATSSILLLLL TLLIYATVSK 60 SSRNHHNSTH QNPTSNDPPL PPPPIAQIRL ACNATRFPDH CVTSLSKPGQ VPPDPKPVQI 120 IHSAISVSYE NLKSGQSKIK AILDSSAENK NRTNIANICL EILSYAQHRT ESTDVAVTGG 180 EIKDARAWMS AALAYQFDCW SGLKTVNDTK QVVDTITFFE DLVNLTGNAL SMMLSFDNFG 240 DDIVSWTRPA TERDGFWEKA GPSLGSGTGK EANLGFPSGL TEDVTVCKNG GKDCKYKTVQ 300 EAVNAAPDTN GTVKFVIRIR EGVYEETVRV PFEKRNVVFI GDGMGKTVIT GSLNVGQPGM 360 TTFNSATVGV LGDGFMARDL TIENTAGADA RQAVAFRSDS DFSVLENCEF LGNQDTVYAH 420 SLRQFYKQCR IEGNVDFIFG NSAAVFQDCD ILIASKHSKL ENGANNAITA HGRIDASQST 480 GFVFSNCSIN GTEEYLKEYQ ANPKGHKNFL GRPWKEFSRT VFVNCNLGSL ISPDGWMPWS 540 GDFALKTLYY GEYKNTGPGS DRSNRVPWSS EIPEKHVDVY SVANFIQADE WASTTA* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 3.0e-104 | 55 | 595 | 573 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 3.0e-107 | 91 | 596 | 562 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-108 | 118 | 595 | 490 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-153 | 283 | 589 | 310 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 55 | 596 | 542 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM91523.1 | 0 | 189 | 596 | 1 | 409 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| DDBJ | BAB09534.1 | 0 | 86 | 596 | 69 | 577 | pectin methylesterase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_196538.1 | 0 | 86 | 596 | 43 | 551 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | NP_568991.2 | 0 | 1 | 596 | 1 | 602 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002281640.1 | 0 | 43 | 596 | 2 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 283 | 568 | 8 | 281 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 280 | 595 | 1 | 307 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 8e-20 | 281 | 560 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 8e-20 | 281 | 560 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 8e-20 | 281 | 560 | 3 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
