| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10026189m |
| Family | AA1 |
| Protein Properties | Length: 546 Molecular Weight: 60608 Isoelectric Point: 9.8011 |
| Chromosome | Chromosome/Scaffold: 8 Start: 12998737 End: 13001599 |
| Description | SKU5 similar 17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 55 | 503 | 0 |
| QQVILINGQFPGPKLEVVTNDNIILNLINKLDQPFLLTWNGIKQRKNSWQDGVLGTNCPIPPNSNFTYKFQTKDQIGTFNYFPSTAFHKAAGGFGAINVY ARPGIPIPYPVPTADFTLLVGDWFKTNHKTLQQRLDSGGVLPFPDGMLINGQTQTTFSGDQGKTYMLRISNVGLSNTFNFRIQGHTMKVVEVEGSHVIQT DYDSLDIHVGQSLAVLVTLNQSPKDYYMVASSRFVRNKLSVMGLLRYSNSHVPASGDPPALPPGELVWSMRQARTFRWNLTANAARPNPQGSFHYGKITP TKTFVFSNSAPLINGKQRYAVNGVSYVNSETPLKLADHFGISGVFTNAIQSVPSNSPPTVATSVVQTSLHDFLEIVFQNNEKSVQSWHLDGYDFWVVGFG SGQWTPAKRSLYNLVDGLTRHTTQVYPNSWTAILVSLDNQGMWNMRSAI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 546 Download |
| MRMASGKTTS LLQLLLLLGA LTLLSSLVIV KGESPYKFYT WTVTYGIISP LGVPQQVILI 60 NGQFPGPKLE VVTNDNIILN LINKLDQPFL LTWNGIKQRK NSWQDGVLGT NCPIPPNSNF 120 TYKFQTKDQI GTFNYFPSTA FHKAAGGFGA INVYARPGIP IPYPVPTADF TLLVGDWFKT 180 NHKTLQQRLD SGGVLPFPDG MLINGQTQTT FSGDQGKTYM LRISNVGLSN TFNFRIQGHT 240 MKVVEVEGSH VIQTDYDSLD IHVGQSLAVL VTLNQSPKDY YMVASSRFVR NKLSVMGLLR 300 YSNSHVPASG DPPALPPGEL VWSMRQARTF RWNLTANAAR PNPQGSFHYG KITPTKTFVF 360 SNSAPLINGK QRYAVNGVSY VNSETPLKLA DHFGISGVFT NAIQSVPSNS PPTVATSVVQ 420 TSLHDFLEIV FQNNEKSVQS WHLDGYDFWV VGFGSGQWTP AKRSLYNLVD GLTRHTTQVY 480 PNSWTAILVS LDNQGMWNMR SAIWERQYSG QQFYMRVWNP VQSLANEYNP PDNLQLCGKA 540 VGRHP* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 0 | 28 | 545 | 519 | + oxidoreductase | ||
| PLN02354 | PLN02354 | 0 | 28 | 542 | 526 | + copper ion binding / oxidoreductase | ||
| PLN02991 | PLN02991 | 0 | 29 | 544 | 518 | + oxidoreductase | ||
| PLN02792 | PLN02792 | 0 | 30 | 544 | 523 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 0 | 34 | 539 | 523 | + copper ion binding / pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAM61328.1 | 0 | 1 | 544 | 1 | 545 | pectinesterase-like protein [Arabidopsis thaliana] |
| DDBJ | BAB08634.1 | 0 | 3 | 544 | 1 | 543 | pectinesterase like protein [Arabidopsis thaliana] |
| EMBL | CBI18560.1 | 0 | 12 | 545 | 1 | 535 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_569041.1 | 0 | 1 | 544 | 1 | 545 | sks17 (SKU5 Similar 17); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002270831.1 | 0 | 11 | 545 | 1 | 536 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 37 | 510 | 4 | 516 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 1asq_A | 0 | 37 | 510 | 4 | 516 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 1asp_B | 0 | 37 | 510 | 4 | 516 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 1asp_A | 0 | 37 | 510 | 4 | 516 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 1aso_B | 0 | 37 | 510 | 4 | 516 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
