| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10026217m |
| Family | GH14 |
| Protein Properties | Length: 532 Molecular Weight: 60197 Isoelectric Point: 8.4146 |
| Chromosome | Chromosome/Scaffold: 8 Start: 8674082 End: 8678300 |
| Description | beta-amylase 4 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 95 | 520 | 0 |
| FVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFCPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGVSLPLW IREIGVVNKDIYYRDKNGFSNNDYLTLGVDQLPLFGGRTAVQCYEDFMLSFSTNFEPYFGDVIEEISIGLGPSGELRYPAHPSGDGRWKFPGIGEFQCHD KYMMEDLMAVASQEGKPQWGGRDIPDTGCYNSFPSGVPFFEEGNDSFLSDYGRFFLEWYSGKLICHADAILAKAADVLRRRQEEEKSSVMLVAKIGGIYW WYKTSSHPAELTAGYYNTALRDGYDPVASVLSRHGAALHIPCLDMADTETPEKYLCSPEGLRRQIHDVSKKWTIHVTGRNTSERFDEMGLRQIRENCVQP NGDTLRSFTFCRMNEKIFRVENWNNF | |||
| Full Sequence |
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| Protein Sequence Length: 532 Download |
| MAEIGVIGCG CRGVSGGNFF HPGGFSLKSC FLEQRTKRNR NFFRSVSMIP PFKRGRFINK 60 LRSVAGNSRI FSMDAREKSR SFVLVSSRHK RVPVFVMMPI DTFGIDASGC PKIKRLKALT 120 VSLKALKLAG VHGIAVEVWW GIVERFCPLE FKWSLYEELF RLISEAGLKL HVALCFHSNM 180 HLFGGKGGVS LPLWIREIGV VNKDIYYRDK NGFSNNDYLT LGVDQLPLFG GRTAVQCYED 240 FMLSFSTNFE PYFGDVIEEI SIGLGPSGEL RYPAHPSGDG RWKFPGIGEF QCHDKYMMED 300 LMAVASQEGK PQWGGRDIPD TGCYNSFPSG VPFFEEGNDS FLSDYGRFFL EWYSGKLICH 360 ADAILAKAAD VLRRRQEEEK SSVMLVAKIG GIYWWYKTSS HPAELTAGYY NTALRDGYDP 420 VASVLSRHGA ALHIPCLDMA DTETPEKYLC SPEGLRRQIH DVSKKWTIHV TGRNTSERFD 480 EMGLRQIREN CVQPNGDTLR SFTFCRMNEK IFRVENWNNF VPFIRQMSAD M* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 1.0e-101 | 92 | 530 | 446 | + beta-amylase | ||
| PLN00197 | PLN00197 | 3.0e-135 | 90 | 527 | 443 | + beta-amylase; Provisional | ||
| PLN02801 | PLN02801 | 1.0e-135 | 92 | 530 | 454 | + beta-amylase | ||
| PLN02803 | PLN02803 | 9.0e-150 | 50 | 528 | 486 | + beta-amylase | ||
| PLN02161 | PLN02161 | 0 | 1 | 531 | 531 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK76508.1 | 0 | 48 | 531 | 1 | 484 | putative beta-amylase [Arabidopsis thaliana] |
| GenBank | AAK84008.1 | 0 | 86 | 528 | 77 | 508 | AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum] |
| DDBJ | BAH20280.1 | 0 | 34 | 531 | 1 | 498 | AT5G55700 [Arabidopsis thaliana] |
| RefSeq | NP_568829.2 | 0 | 1 | 531 | 1 | 531 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002265698.1 | 0 | 1 | 531 | 1 | 522 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1v3i_A | 0 | 92 | 530 | 12 | 444 | A Chain A, The Roles Of Glu186 And Glu380 In The Catalytic Reaction Of Soybean Beta-Amylase |
| PDB | 1b1y_A | 0 | 92 | 531 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1q6d_A | 0 | 92 | 530 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1wds_A | 0 | 92 | 530 | 12 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| PDB | 1wdp_A | 0 | 92 | 530 | 12 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta- Amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EE465458 | 241 | 244 | 484 | 0 |
| EV096717 | 235 | 115 | 349 | 0 |
| ES906343 | 258 | 1 | 257 | 0 |
| DR365735 | 223 | 87 | 309 | 0 |
| FY454531 | 281 | 1 | 276 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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