Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10026261m |
Family | CBM43 |
Protein Properties | Length: 509 Molecular Weight: 55955.5 Isoelectric Point: 8.0123 |
Chromosome | Chromosome/Scaffold: 8 Start: 9044519 End: 9047581 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 371 | 453 | 7.1e-31 |
WCIASSKASERDLKGALDWACGPGNVDCTAIQPSQPCFQPDTLVSHASFVFNSYFQQNRATDVACSFGGAGVKVNKDPSYDKC | |||
GH17 | 28 | 348 | 0 |
VGVCYGRSADDLPTPAKVVQLIKQHNIDYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSTVNTWLKNSVLPYYPTTKITYITVGAESTDDPH INASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSPFMIDLYPYYAYRDSPNNVSLDYVLFESSSE VIDPNTGLLYKNMFDAQVDALYYALMALNFRTIKIMVTETGWPTKGSPKEKAAASPDNAETYNSNIIRHVVTNQGTPAKPGEAMNVYIFSLFNENRKTGL ESERNWGLFYPDQTSVYQLDF |
Full Sequence |
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Protein Sequence Length: 509 Download |
MTRDFKLIFS ISLMLLLLLL DCCYGGKVGV CYGRSADDLP TPAKVVQLIK QHNIDYVRIY 60 DYNSQVLKAF GNTSIELMIG VPNSDLNAFS QSQSTVNTWL KNSVLPYYPT TKITYITVGA 120 ESTDDPHINA SSFVVPAMQN VLTALRKVGL SRRIKVSTTL SLGILSRSFP PSAGAFNSSY 180 AYFLRPMLEF LAENKSPFMI DLYPYYAYRD SPNNVSLDYV LFESSSEVID PNTGLLYKNM 240 FDAQVDALYY ALMALNFRTI KIMVTETGWP TKGSPKEKAA ASPDNAETYN SNIIRHVVTN 300 QGTPAKPGEA MNVYIFSLFN ENRKTGLESE RNWGLFYPDQ TSVYQLDFTG KSNAFHSNSS 360 GTNSSGNSNS WCIASSKASE RDLKGALDWA CGPGNVDCTA IQPSQPCFQP DTLVSHASFV 420 FNSYFQQNRA TDVACSFGGA GVKVNKDPSY DKCIYITAGG NKTKATNATA LTSSASTSCG 480 NKLLRWIFKL CLMISLSFSL QTMISQEL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-8 | 258 | 339 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-19 | 371 | 442 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-36 | 371 | 455 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 9.0e-100 | 34 | 348 | 315 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABD91576.1 | 0 | 1 | 472 | 1 | 471 | beta-1,3-glucanase [Medicago sativa] |
GenBank | ABD91577.1 | 0 | 1 | 472 | 1 | 471 | beta-1,3-glucanase [Medicago sativa] |
RefSeq | NP_200470.1 | 0 | 1 | 508 | 1 | 506 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002283473.1 | 0 | 1 | 498 | 1 | 493 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
RefSeq | XP_002514201.1 | 0 | 1 | 471 | 1 | 467 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 348 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 27 | 349 | 1 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |