| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10026290m |
| Family | AA1 |
| Protein Properties | Length: 491 Molecular Weight: 54637 Isoelectric Point: 9.3013 |
| Chromosome | Chromosome/Scaffold: 8 Start: 5357597 End: 5360656 |
| Description | SKU5 similar 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 39 | 490 | 0 |
| TASPLGTRQQVIGINGQFPGPVLNVTTNWNVVMNVKNNLDEPLLLTWNGIQQRKNSWQDGVLGTNCPIPAGWNWTYEFQVKDQIGSFFYFPSINFQRASG GYGGIIINNRDIIPVPFARPDGDVTLFISDWYTKSHKKLRKDVEGKKGLGTPDGILINGFGPFPYTRELASNGIPFGTINVEPGKTYRFRVHNSGIATSL NFRIQNHNLFLVETEGSYTVQQNYTNMDIHVGQSFSFLVTMDQSGSNDYYIVASPRFATSVKTSGVAILRYSSSQGPALGPLPDPPVELDASFSMNQARS LRLNLSAGAARPNPQGSFKYGQITVTDVYVIVNRPPEMIEGRWRATLNGISYLPPSTPLKLAQQYNISGVYKLDFPKRPMNRHPRVDTSVINGTFKGFVE IIFQNSDTTVKSYHLDGYAFFVVGMDFGLWTENSRSIYNKGDAVARSTTQVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 491 Download |
| MRYCPLHLWC ISVVVFLSVT GTLAADPYVF FDWTVSYLTA SPLGTRQQVI GINGQFPGPV 60 LNVTTNWNVV MNVKNNLDEP LLLTWNGIQQ RKNSWQDGVL GTNCPIPAGW NWTYEFQVKD 120 QIGSFFYFPS INFQRASGGY GGIIINNRDI IPVPFARPDG DVTLFISDWY TKSHKKLRKD 180 VEGKKGLGTP DGILINGFGP FPYTRELASN GIPFGTINVE PGKTYRFRVH NSGIATSLNF 240 RIQNHNLFLV ETEGSYTVQQ NYTNMDIHVG QSFSFLVTMD QSGSNDYYIV ASPRFATSVK 300 TSGVAILRYS SSQGPALGPL PDPPVELDAS FSMNQARSLR LNLSAGAARP NPQGSFKYGQ 360 ITVTDVYVIV NRPPEMIEGR WRATLNGISY LPPSTPLKLA QQYNISGVYK LDFPKRPMNR 420 HPRVDTSVIN GTFKGFVEII FQNSDTTVKS YHLDGYAFFV VGMDFGLWTE NSRSIYNKGD 480 AVARSTTQVL * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02991 | PLN02991 | 2.0e-155 | 15 | 489 | 476 | + oxidoreductase | ||
| PLN02168 | PLN02168 | 7.0e-162 | 1 | 489 | 493 | + copper ion binding / pectinesterase | ||
| PLN02835 | PLN02835 | 1.0e-167 | 6 | 489 | 485 | + oxidoreductase | ||
| PLN00044 | PLN00044 | 0 | 24 | 490 | 474 | + multi-copper oxidase-related protein; Provisional | ||
| PLN02354 | PLN02354 | 0 | 8 | 489 | 486 | + copper ion binding / oxidoreductase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAA96965.1 | 0 | 1 | 490 | 1 | 478 | pectinesterase-like protein [Arabidopsis thaliana] |
| EMBL | CBI35585.1 | 0 | 23 | 490 | 24 | 494 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_199656.1 | 0 | 1 | 490 | 1 | 484 | sks3 (SKU5 Similar 3); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
| RefSeq | XP_002321241.1 | 0 | 10 | 490 | 9 | 490 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002527262.1 | 0 | 10 | 490 | 6 | 492 | multicopper oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 31 | 490 | 6 | 486 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asq_A | 0 | 31 | 490 | 6 | 486 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_B | 0 | 31 | 490 | 6 | 486 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1asp_A | 0 | 31 | 490 | 6 | 486 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
| PDB | 1aso_B | 0 | 31 | 490 | 6 | 486 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
