Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10026302m |
Family | GT5 |
Protein Properties | Length: 488 Molecular Weight: 55203.6 Isoelectric Point: 6.7187 |
Chromosome | Chromosome/Scaffold: 8 Start: 12645548 End: 12648479 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 219 | 439 | 0 |
HVIHICTEMAPLVSVGPLASYITGLASALQGKGYLVEVILPKYSTLDLDEIEGLREIEADAYSYFNGQLHANRIWNGVVSGIGVTLIQPLYYSSMFSRDK VYGYTDDFDRFAYFSRASLDYIAKSGKQPDVLHIHNWQTAIVGPLFWDVFVNQGLEGTRILLTCQDFDKGLAPPEKLELCGLDPAELHRLDRLQDNKNPH FVNILKGGVVYSNKVVIMSSS |
Full Sequence |
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Protein Sequence Length: 488 Download |
FWSFPANLAE VTKFRRQRFE LCQMMQAAAA ASNVPVIWNL SLRGSSSKVH ILNPKNQKCH 60 ALHCLRSEGH EDLENSQENI GLPSVTKEAK QKDIWNLFRE AQQNILFLNK QRVAAVEELE 120 KLKKEKYELL ERINQLEEES QIVIKKDKSS LLWELLLHID AMVINGLMNI EEASSMRKLI 180 KEHEVNISEF PLDVLQQGDA KILAELRRFP HKIKRNGLHV IHICTEMAPL VSVGPLASYI 240 TGLASALQGK GYLVEVILPK YSTLDLDEIE GLREIEADAY SYFNGQLHAN RIWNGVVSGI 300 GVTLIQPLYY SSMFSRDKVY GYTDDFDRFA YFSRASLDYI AKSGKQPDVL HIHNWQTAIV 360 GPLFWDVFVN QGLEGTRILL TCQDFDKGLA PPEKLELCGL DPAELHRLDR LQDNKNPHFV 420 NILKGGVVYS NKVVIMSSSR SSIPGLEPTL AIHKDKLVLS PFGLENPMEK DLCCDLHVSA 480 YTSIKNL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK00654 | glgA | 8.0e-39 | 218 | 458 | 253 | + glycogen synthase; Provisional | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 6.0e-43 | 219 | 458 | 259 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 3.0e-43 | 218 | 457 | 254 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PLN02939 | PLN02939 | 1.0e-79 | 133 | 458 | 338 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAK91459.1 | 0 | 25 | 487 | 1 | 460 | At5g65691/F16M2.160 [Arabidopsis thaliana] |
GenBank | ACD13789.1 | 0 | 52 | 465 | 18 | 454 | starch synthase V precursor [Vitis vinifera] |
RefSeq | NP_569018.1 | 0 | 25 | 487 | 1 | 460 | soluble glycogen synthase-related [Arabidopsis thaliana] |
RefSeq | XP_002310316.1 | 0 | 93 | 466 | 66 | 444 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3guh_A | 0.0000008 | 218 | 360 | 1 | 143 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 2r4u_A | 0.0000008 | 218 | 360 | 1 | 143 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 2r4t_A | 0.0000008 | 218 | 360 | 1 | 143 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
PDB | 2qzs_A | 0.0000008 | 218 | 360 | 1 | 143 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
PDB | 3cx4_A | 0.0000009 | 218 | 360 | 1 | 143 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX124729 | 236 | 198 | 432 | 0 |
AV784133 | 193 | 296 | 488 | 0 |
EL455989 | 288 | 187 | 466 | 0 |
CD837426 | 195 | 198 | 391 | 0 |
DR370741 | 179 | 310 | 488 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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