Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10026453m |
Family | GH17 |
Protein Properties | Length: 430 Molecular Weight: 46074.8 Isoelectric Point: 6.7921 |
Chromosome | Chromosome/Scaffold: 8 Start: 2881180 End: 2883424 |
Description | Glycosyl hydrolase family 17 protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 344 | 0 |
LGVNYGLTADNLPPPSASAKLLQSTTFQKVRLYGADPAVIKALANTGIEIVIGASNGDVPGLASDPGFARTWVETNVLPYYPASKIVLIAVGNEVTTYGD DTLMSQLLPAMKNVQSALEAASLGGGKIKVSTVHVMSVLAGSDPPSTAVFKPEHADILKGLLEFNSETGSPFAVNPYPFFAYQDDRRPETLAYCLFQTNP GRVDPNSNLKYMNMFDAQVDAVYSALRSMGFKDVEIMVAETGWPYKGDPEEGGATVENARAYNKNLIAHLKSGTGTPLMPGRVIDTYLFALYDENLKPGK GSERAFGLFKPDLTMTYDI |
Full Sequence |
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Protein Sequence Length: 430 Download |
MAASVYSLLL LFFFSCLHLS KSQPFLGVNY GLTADNLPPP SASAKLLQST TFQKVRLYGA 60 DPAVIKALAN TGIEIVIGAS NGDVPGLASD PGFARTWVET NVLPYYPASK IVLIAVGNEV 120 TTYGDDTLMS QLLPAMKNVQ SALEAASLGG GKIKVSTVHV MSVLAGSDPP STAVFKPEHA 180 DILKGLLEFN SETGSPFAVN PYPFFAYQDD RRPETLAYCL FQTNPGRVDP NSNLKYMNMF 240 DAQVDAVYSA LRSMGFKDVE IMVAETGWPY KGDPEEGGAT VENARAYNKN LIAHLKSGTG 300 TPLMPGRVID TYLFALYDEN LKPGKGSERA FGLFKPDLTM TYDIGLTKTT NQSSLAPRLP 360 PAAAPTRQTL PAAPPQMILP SPVTPSYKNS GQTDVHNSTP RSASLAHICR SLSVSASMLF 420 VFVLYALII* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-9 | 25 | 337 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 6.0e-100 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB10628.1 | 0 | 1 | 331 | 1 | 331 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | NP_199086.2 | 0 | 1 | 411 | 1 | 418 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002282736.1 | 0 | 12 | 360 | 11 | 361 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002329954.1 | 0 | 7 | 350 | 9 | 351 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510373.1 | 0 | 4 | 365 | 7 | 366 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 23 | 347 | 1 | 315 | A Chain A, Crystal Structure Of N-Terminal Domain Of Human Galectin-8 |
PDB | 3ur8_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Crystal Structure Of N-Terminal Domain Of Human Galectin-8 |
PDB | 3ur7_B | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 23 | 347 | 1 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |