Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10027167m |
Family | CBM43 |
Protein Properties | Length: 199 Molecular Weight: 19995 Isoelectric Point: 7.6575 |
Chromosome | Chromosome/Scaffold: 8 Start: 10865689 End: 10868374 |
Description | plasmodesmata callose-binding protein 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 21 | 103 | 1.3e-32 |
WCVCKTGLSDTVLQQTLDYACGNGADCNPIKPKQSCFNPDNVRSHCSYAVNSFFQKKGQSSGTCDFKGTATPTSSDPSYTGCN |
Full Sequence |
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Protein Sequence Length: 199 Download |
MAVLFLSLLL VAMAGHSSAS WCVCKTGLSD TVLQQTLDYA CGNGADCNPI KPKQSCFNPD 60 NVRSHCSYAV NSFFQKKGQS SGTCDFKGTA TPTSSDPSYT GCNFPTSASG SGGSTTVSPG 120 TSSPKGSSTT TTLPGSGTNS PYSGTSTNGA FGGNSTGINT GTGINPDYTT DNSAFALQNS 180 SKLFIGLLLI ASSVSVLS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-19 | 20 | 91 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-36 | 20 | 104 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM64809.1 | 0 | 1 | 185 | 1 | 184 | unknown [Arabidopsis thaliana] |
RefSeq | NP_196417.1 | 0 | 13 | 185 | 13 | 184 | E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | NP_200921.2 | 0 | 15 | 193 | 15 | 193 | PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | NP_564059.1 | 0 | 1 | 190 | 1 | 176 | PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002284112.1 | 0 | 1 | 190 | 1 | 205 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-25 | 17 | 106 | 9 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |