Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10027366m |
Family | CBM43 |
Protein Properties | Length: 131 Molecular Weight: 14358 Isoelectric Point: 5.0864 |
Chromosome | Chromosome/Scaffold: 8 Start: 11701825 End: 11702314 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 41 | 125 | 2.8e-34 |
WCVASEKATDEQLQSDIDWLCSDEGGFRDCTPISPGGVCYEPNTLRDHASYVMNSYYQELGRTKAQCTFSGTGTTVHTDPSHGAC |
Full Sequence |
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Protein Sequence Length: 131 Download |
MVAETRTMSR SLTFFFFLLL SVSVTATLRN LSRAAENKGV WCVASEKATD EQLQSDIDWL 60 CSDEGGFRDC TPISPGGVCY EPNTLRDHAS YVMNSYYQEL GRTKAQCTFS GTGTTVHTDP 120 SHGACVYVSY * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 1.0e-20 | 41 | 114 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-35 | 41 | 127 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001078361.1 | 3e-29 | 8 | 129 | 4 | 116 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_001118955.1 | 3e-29 | 8 | 129 | 4 | 116 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_192648.2 | 1e-29 | 11 | 129 | 6 | 116 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_201129.1 | 0 | 5 | 130 | 3 | 129 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | NP_201130.1 | 0 | 1 | 130 | 1 | 131 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-26 | 39 | 129 | 11 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |