Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10027747m |
Family | CE8 |
Protein Properties | Length: 539 Molecular Weight: 59114.4 Isoelectric Point: 9.8928 |
Chromosome | Chromosome/Scaffold: 8 Start: 6890415 End: 6892321 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 224 | 522 | 0 |
LVVAKDGSGQFTTVQAAIDVAGRRKSMSGRFVIYVKRGIYQENINVRLYNDNIMLVGDGMRSTIITGGRSVKGGYTTYNSATAGIEGLHFIAKGIAFRNT AGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAASVFQNCLILPRRPLKGQANVITAQGRADPFQNTGISIHNSRI VPAPDLKPVLSSVKTYMGRPWMKYSRTVVLQTYLDSVVSPVGWSPWIEGSGFGLDTLFYAEYKNTGPASSTRWRVRWKGFHVLGRASDASAFTVGKFIA |
Full Sequence |
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Protein Sequence Length: 539 Download |
MMLQKFSSQS LHLILLSLLC LRPFTTVVDG NSTSGQGVDR WCDKTPYPDP CKSYFKNHNG 60 FRQPTQLSEF RVMLVEAAMD RAVSARDELT NSGRNCTDCK KQAVLTDCID LYGDTIMQLN 120 RTLQGVSPNA VAEKRCSDFD AQTWLSTALT NTETCRRGSS DFNVSDFITP IVSNTKISNL 180 ISNCLAINGA LLPAGNNGTT TNAGFPTWVS GKDRRLLRTV RANLVVAKDG SGQFTTVQAA 240 IDVAGRRKSM SGRFVIYVKR GIYQENINVR LYNDNIMLVG DGMRSTIITG GRSVKGGYTT 300 YNSATAGIEG LHFIAKGIAF RNTAGPAKGQ AVALRSSSDL SIFYKCSIEG YQDTLMVHSQ 360 RQFYRECYIY GTVDFIFGNA ASVFQNCLIL PRRPLKGQAN VITAQGRADP FQNTGISIHN 420 SRIVPAPDLK PVLSSVKTYM GRPWMKYSRT VVLQTYLDSV VSPVGWSPWI EGSGFGLDTL 480 FYAEYKNTGP ASSTRWRVRW KGFHVLGRAS DASAFTVGKF IAGTAWLPRT GIPFTSGL* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 7.0e-151 | 25 | 538 | 538 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 5.0e-156 | 42 | 538 | 545 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-159 | 42 | 538 | 507 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 8.0e-173 | 223 | 523 | 301 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 0 | 1 | 538 | 540 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_190324.1 | 0 | 28 | 538 | 75 | 594 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199962.1 | 0 | 1 | 538 | 3 | 536 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199963.1 | 0 | 1 | 538 | 4 | 540 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264861.1 | 0 | 41 | 538 | 33 | 523 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
RefSeq | XP_002510939.1 | 0 | 34 | 538 | 27 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 219 | 538 | 4 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 220 | 538 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-18 | 223 | 466 | 5 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-18 | 223 | 466 | 5 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-18 | 223 | 466 | 5 | 279 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |