| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10027753m |
| Family | GT43 |
| Protein Properties | Length: 506 Molecular Weight: 56725.4 Isoelectric Point: 10.0736 |
| Chromosome | Chromosome/Scaffold: 8 Start: 12896300 End: 12898001 |
| Description | Nucleotide-diphospho-sugar transferases superfamily protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT43 | 174 | 416 | 0 |
| MHSLMLVPYDLVWIVVEAGGVTNETASFIAKSGLKTIHLGFDEKMPNTWEDRHKLETKMRLHAFRIVGEKKLDGIVMFADDSNMHSMELFDEIQTVKWVG ALSVGILAHSGNADELSSVLKNQQGKHKEKPLMPIQGPSCDSSEKLVGWHIFNTQPYAKKTAVYIDEKAAVMPSKMEWSGFVFNSRLLWKESVDDKPAWV KDLHLLDDTEEIDSPLSFVKDPSMVEPLGSCGRRVLLWWLRVE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 506 Download |
| MKLSVFRLSY WNRRGYTFRS SPLLDPTFDG KSPSSVFWLV IHALCCLISL ILGFRFSHLV 60 LFFLFSTSVT NLYTTPFLTA GNGGVSQLLR LKPLETATNS TAKKNSRVVV GRHGIRIRPW 120 PHPNPIEVLR AHQLLVRVQK EQKSLYGVRS PKTLIVVTPT YVRTFQALHL TGVMHSLMLV 180 PYDLVWIVVE AGGVTNETAS FIAKSGLKTI HLGFDEKMPN TWEDRHKLET KMRLHAFRIV 240 GEKKLDGIVM FADDSNMHSM ELFDEIQTVK WVGALSVGIL AHSGNADELS SVLKNQQGKH 300 KEKPLMPIQG PSCDSSEKLV GWHIFNTQPY AKKTAVYIDE KAAVMPSKME WSGFVFNSRL 360 LWKESVDDKP AWVKDLHLLD DTEEIDSPLS FVKDPSMVEP LGSCGRRVLL WWLRVEARAD 420 SKFPPGWIIN SPLEITLPSK RTPWPDSSSE LPEAIREGKN SQSGTERHPT KARGSKSKSS 480 KGGKQEPKTS DSVNVSATIV KDTNQ* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02458 | PLN02458 | 5.0e-17 | 152 | 383 | 244 | + transferase, transferring glycosyl groups | ||
| pfam03360 | Glyco_transf_43 | 6.0e-48 | 173 | 417 | 253 | + Glycosyltransferase family 43. | ||
| cd00218 | GlcAT-I | 5.0e-74 | 152 | 417 | 273 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI93186.1 | 0 | 1 | 478 | 1 | 476 | glycosyltransferase [Gossypium raimondii] |
| EMBL | CBI21374.1 | 0 | 1 | 468 | 1 | 441 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_195407.2 | 0 | 1 | 442 | 1 | 453 | IRX14 (irregular xylem 14); transferase, transferring glycosyl groups / xylosyltransferase [Arabidopsis thaliana] |
| RefSeq | NP_201524.1 | 0 | 1 | 498 | 1 | 491 | glycosyl transferase family 43 protein [Arabidopsis thaliana] |
| RefSeq | XP_002283249.1 | 0 | 1 | 468 | 1 | 479 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2d0j_D | 0.00000000002 | 153 | 323 | 4 | 154 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_C | 0.00000000002 | 153 | 323 | 4 | 154 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_B | 0.00000000002 | 153 | 323 | 4 | 154 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 2d0j_A | 0.00000000002 | 153 | 323 | 4 | 154 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
| PDB | 1kws_B | 0.0000000004 | 153 | 281 | 2 | 148 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
