y
Basic Information | |
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Species | Capsella rubella |
Cazyme ID | Carubv10027757m |
Family | GT77 |
Protein Properties | Length: 389 Molecular Weight: 44752.1 Isoelectric Point: 9.5297 |
Chromosome | Chromosome/Scaffold: 8 Start: 1409257 End: 1410732 |
Description | |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT77 | 144 | 342 | 0 |
LKHVIAVCLDSKAYDRCVQVHIHCYLINTSDSEELSGINQFMSPSYLKLIWRRMDLLKEVLSLGYNFLFTDADILWFRDPFPRFLSNVDLQISCDGYNGK PSDKNNYVNAGFIYVKANNKTLNFYKYWCDSSKRFPKRHDQNVFNSIKNEPFVVELGITMRFLDTVYFGGFCQPSRDINLVNTMHANCCIGLENKVKNL |
Full Sequence |
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Protein Sequence Length: 389 Download |
MSMSTGSSSF PGKKLACPGG KGRAIIRFIC SDSSMTGQRY VMGVVLLLEI ITVYCLFVYT 60 YMKNPPQVMR FQWKSHWYSP NQTSLKLIER TKQVSKLERV LMNAAMEDKT VIITVLNSAW 120 TVPNSTFDLF LESFQTGIGT ERLLKHVIAV CLDSKAYDRC VQVHIHCYLI NTSDSEELSG 180 INQFMSPSYL KLIWRRMDLL KEVLSLGYNF LFTDADILWF RDPFPRFLSN VDLQISCDGY 240 NGKPSDKNNY VNAGFIYVKA NNKTLNFYKY WCDSSKRFPK RHDQNVFNSI KNEPFVVELG 300 ITMRFLDTVY FGGFCQPSRD INLVNTMHAN CCIGLENKVK NLRAALQDWK QYLSANTKVT 360 EIKWSIPPRL LRFVKKPPIM MALTSGLYP 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 1.0e-71 | 143 | 342 | 208 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM61239.1 | 0 | 30 | 372 | 18 | 366 | regulatory protein [Arabidopsis thaliana] |
RefSeq | NP_193730.1 | 0 | 20 | 373 | 23 | 378 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_193730.1 | 0 | 33 | 367 | 379 | 711 | unknown protein [Arabidopsis thaliana] |
RefSeq | NP_199295.2 | 0 | 35 | 372 | 24 | 366 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002315829.1 | 0 | 31 | 367 | 35 | 380 | predicted protein [Populus trichocarpa] |