| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10027828m |
| Family | AA1 |
| Protein Properties | Length: 565 Molecular Weight: 63581.8 Isoelectric Point: 7.2481 |
| Chromosome | Chromosome/Scaffold: 8 Start: 5104937 End: 5107325 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 19 | 552 | 0 |
| CIAHHYTFIVKEAPYTKLCSTKKILTVNGLFPGPVLKAYKGDTIYVTVRNQASENITMHWHGVEQPRNPWSDGPEYITQCPIRPGSEFTYKVIFSIEDTT VWWHAHSSWTRATVHGLIFIYPWLPESLPFLKADHEVPLILGEWWKQDVREVVEEFIRTGGAPNVSDALTINGHPGFLYPCSKSDTFHLLVEEGKTYRIR MVNAAVNLILFFAIANHNLTVVGADGHYTKPLNATYITISPGETLDLLLKADQNPKNTYYMAARAYQTGNIEFNNSTTIGVLRYISSSKAETLMFSGIYP NLPFYNDTSAAFGFFTKIKSLYSGQAPPLVSRRIVTTISINLLRCPQNSCAGPNGSRLAASMNNISFVTPSHVDILKAYYLHIKGVYGTRFPDIPPYIFN FTAENQPLFLQTPRLATEVKVLEFGEVVELVIQGTSLVGGGLDHPMHLHGFSFHVVGVGFGNYNTSDEDPSSTYNLDDPPYKNTMTVPRNGWIAIRFAAI NPGVWFMHCHFDRHQTWGMNVVFIVKNGIWPNQQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MLHFLSYFFL ISLFLYNNCI AHHYTFIVKE APYTKLCSTK KILTVNGLFP GPVLKAYKGD 60 TIYVTVRNQA SENITMHWHG VEQPRNPWSD GPEYITQCPI RPGSEFTYKV IFSIEDTTVW 120 WHAHSSWTRA TVHGLIFIYP WLPESLPFLK ADHEVPLILG EWWKQDVREV VEEFIRTGGA 180 PNVSDALTIN GHPGFLYPCS KSDTFHLLVE EGKTYRIRMV NAAVNLILFF AIANHNLTVV 240 GADGHYTKPL NATYITISPG ETLDLLLKAD QNPKNTYYMA ARAYQTGNIE FNNSTTIGVL 300 RYISSSKAET LMFSGIYPNL PFYNDTSAAF GFFTKIKSLY SGQAPPLVSR RIVTTISINL 360 LRCPQNSCAG PNGSRLAASM NNISFVTPSH VDILKAYYLH IKGVYGTRFP DIPPYIFNFT 420 AENQPLFLQT PRLATEVKVL EFGEVVELVI QGTSLVGGGL DHPMHLHGFS FHVVGVGFGN 480 YNTSDEDPSS TYNLDDPPYK NTMTVPRNGW IAIRFAAINP GVWFMHCHFD RHQTWGMNVV 540 FIVKNGIWPN QQLLPPPDDL PPCH* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 3.0e-46 | 28 | 545 | 555 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| PLN02604 | PLN02604 | 4.0e-62 | 23 | 541 | 554 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 6.0e-63 | 24 | 542 | 549 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 3.0e-77 | 23 | 541 | 549 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 19 | 552 | 538 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC78283.1 | 0 | 23 | 554 | 30 | 564 | putative laccase [Rosa hybrid cultivar] |
| GenBank | ACU17753.1 | 0 | 4 | 563 | 11 | 566 | unknown [Glycine max] |
| DDBJ | BAB11074.1 | 0 | 76 | 553 | 1 | 478 | laccase (diphenol oxidase) [Arabidopsis thaliana] |
| RefSeq | NP_199621.2 | 0 | 1 | 553 | 1 | 553 | TT10 (TRANSPARENT TESTA 10); copper ion binding / laccase [Arabidopsis thaliana] |
| RefSeq | XP_002264394.1 | 0 | 1 | 563 | 9 | 567 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 23 | 553 | 5 | 536 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1asq_A | 0 | 23 | 553 | 5 | 536 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1asp_B | 0 | 23 | 553 | 5 | 536 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1asp_A | 0 | 23 | 553 | 5 | 536 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
| PDB | 1aso_B | 0 | 23 | 553 | 5 | 536 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
