| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10027970m |
| Family | AA2 |
| Protein Properties | Length: 330 Molecular Weight: 35970.5 Isoelectric Point: 10.2806 |
| Chromosome | Chromosome/Scaffold: 8 Start: 12822202 End: 12823563 |
| Description | root hair specific 19 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA2 | 39 | 313 | 0 |
| VEQIVRKVVQTKVKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNQSLAGDGFDVVIKAKKALDAIPSCRNKVSCADILTLATRDVVV AAGGPSYKVELGRFDGLVSTAASVTGNLPGPNDKVTQLNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNRTHSVDPTLNKAYAKELQLACPK KVDPRIAINMDPTTPRKFDNLYFKNLQQGKGLFTSDQVLFTDARSRPTVNAWATNSVAFNKAFVTAMTKLGRVGV | |||
| Full Sequence |
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| Protein Sequence Length: 330 Download |
| MARFGLVLVV ALSLAISMFP DTTTAQLNTN FYGKSCPNVE QIVRKVVQTK VKQTFVTIPA 60 TLRLFFHDCF VNGCDASVMI QSTPTNKAEK DHPDNQSLAG DGFDVVIKAK KALDAIPSCR 120 NKVSCADILT LATRDVVVAA GGPSYKVELG RFDGLVSTAA SVTGNLPGPN DKVTQLNKLF 180 AKNKLTQEDM IALSAAHTLG FAHCGKVFNR IYNFNRTHSV DPTLNKAYAK ELQLACPKKV 240 DPRIAINMDP TTPRKFDNLY FKNLQQGKGL FTSDQVLFTD ARSRPTVNAW ATNSVAFNKA 300 FVTAMTKLGR VGVKTRRNGN IRRDCGAFN* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00141 | peroxidase | 1.0e-5 | 262 | 293 | 32 | + Peroxidase. | ||
| cd00691 | ascorbate_peroxidase | 3.0e-18 | 59 | 314 | 274 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. | ||
| pfam00141 | peroxidase | 1.0e-53 | 59 | 198 | 140 | + Peroxidase. | ||
| PLN03030 | PLN03030 | 1.0e-65 | 31 | 329 | 304 | + cationic peroxidase; Provisional | ||
| cd00693 | secretory_peroxidase | 1.0e-149 | 26 | 328 | 303 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004601 | peroxidase activity |
| GO:0006979 | response to oxidative stress |
| GO:0020037 | heme binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA67362.1 | 0 | 21 | 329 | 4 | 312 | peroxidase ATP9a [Arabidopsis thaliana] |
| RefSeq | NP_190565.1 | 0 | 1 | 329 | 1 | 329 | peroxidase, putative [Arabidopsis thaliana] |
| RefSeq | NP_201541.1 | 0 | 1 | 329 | 1 | 329 | peroxidase 73 (PER73) (P73) (PRXR11) [Arabidopsis thaliana] |
| RefSeq | XP_002284278.1 | 0 | 1 | 329 | 1 | 331 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002525252.1 | 0 | 3 | 329 | 7 | 334 | Peroxidase 73 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3hdl_A | 0 | 27 | 329 | 2 | 303 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1qo4_A | 0 | 26 | 325 | 2 | 300 | A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From Royal Palm Tree |
| PDB | 1pa2_A | 0 | 26 | 325 | 2 | 300 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 1gwu_A | 0 | 26 | 329 | 2 | 306 | A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly |
| PDB | 3atj_B | 0 | 26 | 329 | 2 | 306 | A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase In Complex With Benzhydroxamic Acid |
