| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10027986m |
| Family | GH9 |
| Protein Properties | Length: 622 Molecular Weight: 69345.5 Isoelectric Point: 9.0459 |
| Chromosome | Chromosome/Scaffold: 8 Start: 6111239 End: 6113600 |
| Description | glycosyl hydrolase 9A1 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH9 | 108 | 583 | 0 |
| NYTLALHKALKFFNAQKSGRLPKHNNVSWRGNSGLQDGRGETGSFYKDLVGGYYDAGDAIKFNFPMAYAITMLSWSVIEYSAKYEAAGELTHVKELIKWG TDYFLKTFNSTADSIDDLVSQVGSGNTDDGNTDPNDHYCWMRPEDMDYKRPVTTCNGGCSDLAAEMAAALASASIVFKDNKEYSKKLVHGAKTVYQFGRT RRGRYSAGTAESSKFYNSSMYWDEFIWGGAWLYYATGNVTYLNLITQPTMAKHAGAFWGGPYYGVFSWDNKLAGAQLLLSRLRLFLSPGYPYEEILRTFH NQTSIVMCSYLPYFTKFNRTKGGLLELNHGDPQPLQYSANAAFLATLYSDYLDAADTPGWYCGPNFYSTNVLRDFARSQIDYILGKNPRKMSYLVGYGTK YPKHVHHRGASIPKNKVKYNCKGGWKWRDSKKPNPNTIEGAMVAGPDKHDGFRDVRMNYNYTEPTLAGNAGLVAAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 622 Download |
| MYGRDPWGGP LEINTADSAT DDDRSRNLND LDRAALSRPL DETQQSWLLG PTEQKKKKYV 60 DLGCIIVSRK IFVWTVGTIV AAALLAGFII LIVKTVPRHH KKDPPPDNYT LALHKALKFF 120 NAQKSGRLPK HNNVSWRGNS GLQDGRGETG SFYKDLVGGY YDAGDAIKFN FPMAYAITML 180 SWSVIEYSAK YEAAGELTHV KELIKWGTDY FLKTFNSTAD SIDDLVSQVG SGNTDDGNTD 240 PNDHYCWMRP EDMDYKRPVT TCNGGCSDLA AEMAAALASA SIVFKDNKEY SKKLVHGAKT 300 VYQFGRTRRG RYSAGTAESS KFYNSSMYWD EFIWGGAWLY YATGNVTYLN LITQPTMAKH 360 AGAFWGGPYY GVFSWDNKLA GAQLLLSRLR LFLSPGYPYE EILRTFHNQT SIVMCSYLPY 420 FTKFNRTKGG LLELNHGDPQ PLQYSANAAF LATLYSDYLD AADTPGWYCG PNFYSTNVLR 480 DFARSQIDYI LGKNPRKMSY LVGYGTKYPK HVHHRGASIP KNKVKYNCKG GWKWRDSKKP 540 NPNTIEGAMV AGPDKHDGFR DVRMNYNYTE PTLAGNAGLV AALIALSGEE EATGKIDKNT 600 IFSAVPPLFP TPPPPPAPWK P* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02613 | PLN02613 | 3.0e-110 | 107 | 589 | 493 | + endoglucanase | ||
| PLN02266 | PLN02266 | 5.0e-112 | 96 | 587 | 505 | + endoglucanase | ||
| PLN02340 | PLN02340 | 1.0e-113 | 108 | 600 | 505 | + endoglucanase | ||
| PLN02345 | PLN02345 | 6.0e-138 | 112 | 588 | 486 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 6.0e-170 | 108 | 583 | 481 | + Glycosyl hydrolase family 9. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK59818.1 | 0 | 1 | 605 | 1 | 605 | AT5g49720/K2I5_8 [Arabidopsis thaliana] |
| GenBank | AAM63370.1 | 0 | 1 | 605 | 1 | 605 | cellulase homolog OR16pep precursor [Arabidopsis thaliana] |
| GenBank | AAN72232.1 | 0 | 1 | 605 | 1 | 605 | At5g49720/K2I5_8 [Arabidopsis thaliana] |
| EMBL | CAB51903.1 | 0 | 1 | 605 | 1 | 605 | cellulase; endo-1,4-beta-D-glucanase [Brassica napus] |
| RefSeq | NP_199783.1 | 0 | 1 | 605 | 1 | 605 | ATGH9A1 (ARABIDOPSIS THALIANA GLYCOSYL HYDROLASE 9A1); cellulase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1ksc_A | 0 | 108 | 586 | 4 | 428 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
| PDB | 1ks8_A | 0 | 108 | 586 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 105 | 589 | 2 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 105 | 589 | 2 | 443 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
