| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10028260m |
| Family | AA3 |
| Protein Properties | Length: 587 Molecular Weight: 64124.1 Isoelectric Point: 6.1393 |
| Chromosome | Chromosome/Scaffold: 8 Start: 7098771 End: 7100912 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA3 | 75 | 585 | 0 |
| ASFDYIVIGGGTAGCALAATLSQNASVLVLERGGSPYYNPTATDIGNFANTLLNNTPDSWSQLFISEDGVYNTRPRVLGGGSVLNAGFYSRAGDVYVEEA EWEMDEVEAAYEWVEKKLVFEPQVMGWQAALRDGLLEAGESPDNGFTYDHIYGTKIGGTIFDHAGHRHSAANLLEYANSDAIVVYLHASVHKILFTTKAY QVIFEDANGVFHKAELSNNAMNEVILSAGAMGSPQLLMLSGVGPAAHLAAHGVNPLVLDHPMVGQGMADNPLNALFIPSPQPVEVSLVQAVGITKFDSYI EGASGLSLSFDLTSRFFDSVLNLFNETSRTTSRESLTKSIVNLLKPLDLRLNVMLKGGLIIQKIDGPASSGHMELRNRNPKDNPSVTFNYYQEPEDLNKC VEGVATIITVINSKAFSKYKFPGVTAHELLSLMLSLPTNLRPRHLSSIFNLKQFCIDTVMTIWHYHGGCQVGRVVDKNYKVLGLDSLRVIDGSTFLKSPG TNPQATVMMLG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 587 Download |
| MTIINSCIHI FRNILVVVFI FHGSCYSDKG TIPMCDDHDM LNSSYHFNIH AFFLSLCKDG 60 HYTFMKDATL APKLASFDYI VIGGGTAGCA LAATLSQNAS VLVLERGGSP YYNPTATDIG 120 NFANTLLNNT PDSWSQLFIS EDGVYNTRPR VLGGGSVLNA GFYSRAGDVY VEEAEWEMDE 180 VEAAYEWVEK KLVFEPQVMG WQAALRDGLL EAGESPDNGF TYDHIYGTKI GGTIFDHAGH 240 RHSAANLLEY ANSDAIVVYL HASVHKILFT TKAYQVIFED ANGVFHKAEL SNNAMNEVIL 300 SAGAMGSPQL LMLSGVGPAA HLAAHGVNPL VLDHPMVGQG MADNPLNALF IPSPQPVEVS 360 LVQAVGITKF DSYIEGASGL SLSFDLTSRF FDSVLNLFNE TSRTTSRESL TKSIVNLLKP 420 LDLRLNVMLK GGLIIQKIDG PASSGHMELR NRNPKDNPSV TFNYYQEPED LNKCVEGVAT 480 IITVINSKAF SKYKFPGVTA HELLSLMLSL PTNLRPRHLS SIFNLKQFCI DTVMTIWHYH 540 GGCQVGRVVD KNYKVLGLDS LRVIDGSTFL KSPGTNPQAT VMMLGR* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK02106 | PRK02106 | 1.0e-18 | 237 | 343 | 113 | + choline dehydrogenase; Validated | ||
| TIGR03970 | Rv0697 | 2.0e-20 | 148 | 585 | 474 | + dehydrogenase, Rv0697 family. This model describes a set of dehydrogenases belonging to the glucose-methanol-choline oxidoreductase (GMC oxidoreductase) family. Members of the present family are restricted to Actinobacterial genome contexts containing also members of families TIGR03962 and TIGR03969 (the mycofactocin system), and are proposed to be uniform in function. | ||
| pfam05199 | GMC_oxred_C | 6.0e-23 | 441 | 585 | 150 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 8.0e-32 | 75 | 586 | 567 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| PLN02785 | PLN02785 | 0 | 76 | 586 | 520 | + Protein HOTHEAD | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAB11041.1 | 0 | 1 | 586 | 1 | 586 | mandelonitrile lyase-like protein [Arabidopsis thaliana] |
| DDBJ | BAB11043.1 | 0 | 10 | 586 | 8 | 563 | mandelonitrile lyase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_001119417.1 | 0 | 65 | 586 | 1 | 533 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| RefSeq | NP_200006.1 | 0 | 1 | 586 | 1 | 582 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| RefSeq | NP_200008.1 | 0 | 10 | 586 | 8 | 566 | glucose-methanol-choline (GMC) oxidoreductase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ju2_B | 0 | 61 | 586 | 11 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 1ju2_A | 0 | 61 | 586 | 11 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_B | 0 | 61 | 586 | 11 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdp_A | 0 | 61 | 586 | 11 | 507 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3gdn_B | 0 | 61 | 586 | 11 | 507 | A Chain A, Almond Hydroxynitrile Lyase In Complex With Benzaldehyde |
