| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10028274m |
| Family | AA1 |
| Protein Properties | Length: 531 Molecular Weight: 57994.5 Isoelectric Point: 9.0411 |
| Chromosome | Chromosome/Scaffold: 8 Start: 9998644 End: 10000918 |
| Description | laccase 16 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 1 | 517 | 0 |
| MTNTTKLCSSKPIVTVNGKFPGPTIVAREGDTILIKVVNHVNYNVSIHWHGIRQLRTGWADGPAYITQCPIQPGQNYLHNFTLTGQRGTLWWHAHILWLR ATVHGAIVILPKLGVPYPFPKPYKEKTIVLGEWWKSDVEELVNEASKIGTAPMASDAHTINGHSGSIPNCPSQSSYGLPVRAGKTYMLRIINAALNEELF FKIAGHVLTVVEVDAVYTKPYKTDTVYIAPGQTTNVLLTANANAGSNYMVAATTFTDAHIPYDNVTATATLHYIGHTSTVSASKKTVLASLPPQNATWVA TKFTRSLRSLNSHEYPARVPTTVDHSLFFTVGLGANPCPSCSNGVRLVAGINNVTFTMPKTALLQAHFFNISGVFTDDFPAKPANPYDYTAPVKLGVNAA TMKGTKLYRLPYNATVQVVLQNTAMIVPDNHPFHLHGFNFFEVGRGLGNFNPEKDPKMFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMHCHLELHT TWGLKMAFVVDNGHGPD | |||
| Full Sequence |
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| Protein Sequence Length: 531 Download |
| MTNTTKLCSS KPIVTVNGKF PGPTIVAREG DTILIKVVNH VNYNVSIHWH GIRQLRTGWA 60 DGPAYITQCP IQPGQNYLHN FTLTGQRGTL WWHAHILWLR ATVHGAIVIL PKLGVPYPFP 120 KPYKEKTIVL GEWWKSDVEE LVNEASKIGT APMASDAHTI NGHSGSIPNC PSQSSYGLPV 180 RAGKTYMLRI INAALNEELF FKIAGHVLTV VEVDAVYTKP YKTDTVYIAP GQTTNVLLTA 240 NANAGSNYMV AATTFTDAHI PYDNVTATAT LHYIGHTSTV SASKKTVLAS LPPQNATWVA 300 TKFTRSLRSL NSHEYPARVP TTVDHSLFFT VGLGANPCPS CSNGVRLVAG INNVTFTMPK 360 TALLQAHFFN ISGVFTDDFP AKPANPYDYT APVKLGVNAA TMKGTKLYRL PYNATVQVVL 420 QNTAMIVPDN HPFHLHGFNF FEVGRGLGNF NPEKDPKMFN LVDPVERNTV GVPAGGWTAI 480 RFIADNPGVW FMHCHLELHT TWGLKMAFVV DNGHGPDQSL LPPPADLPKC * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02191 | PLN02191 | 5.0e-72 | 8 | 520 | 551 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 4.0e-89 | 8 | 508 | 532 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 1.0e-99 | 8 | 508 | 537 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 1 | 530 | 534 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABE66261.1 | 0 | 1 | 530 | 1 | 530 | laccase/diphenol oxidase [Arabidopsis thaliana] |
| GenBank | ABK28766.1 | 0 | 1 | 530 | 1 | 530 | unknown [Arabidopsis thaliana] |
| RefSeq | NP_200699.1 | 0 | 1 | 530 | 1 | 523 | LAC16 (laccase 16); laccase [Arabidopsis thaliana] |
| Swiss-Prot | Q1PDH6 | 0 | 1 | 530 | 37 | 566 | LAC16_ARATH RecName: Full=Laccase-16; AltName: Full=Benzenediol:oxygen oxidoreductase 16; AltName: Full=Urishiol oxidase 16; AltName: Full=Diphenol oxidase 16; Flags: Precursor |
| RefSeq | XP_002520425.1 | 0 | 1 | 530 | 34 | 556 | laccase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 8 | 508 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1asq_A | 0 | 8 | 508 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1asp_B | 0 | 8 | 508 | 19 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797675 | 501 | 36 | 531 | 0 |
| EL453925 | 337 | 44 | 379 | 0 |
| DY294712 | 404 | 76 | 476 | 0 |
| EE260547 | 275 | 5 | 279 | 0 |
| JG648618 | 296 | 1 | 296 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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