Basic Information | |
---|---|
Species | Capsella rubella |
Cazyme ID | Carubv10028350m |
Family | CE8 |
Protein Properties | Length: 542 Molecular Weight: 59757.6 Isoelectric Point: 9.9433 |
Chromosome | Chromosome/Scaffold: 8 Start: 6893837 End: 6895608 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 226 | 525 | 0 |
NVVVAKDGSGHFKTVQAAIDLAGRRKVMSGRYVIYVKRGIYQENINVRLNNDNVMLVGDGMRYTIITSGRSVKGGYTTYSSATAGIEGLHFIAKGIAFRN TAGPAKGQAVALRSSSDLSIFYRCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAVVLQNCIILPRRPLKGQSNVTTAQGRSDLFQNTGISIHKSI ILPASDLIPVVRSVKTYMGRPWMKYSRTVVLKTYIDSVVSPVGWSTWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFTVGKFIA |
Full Sequence |
---|
Protein Sequence Length: 542 Download |
MNMVMHKVCF LSLHLLSLLL CLHPLTTVAD NNSTGIDPWC DKTPYPYPCK RYFTKHFGFR 60 QPTQISEFRV LLVEAAMDRA ISARDKLANS SKNCTIDCKK QAVLADCLDL YGDTVMQLNR 120 TLQGVSSKPG LGKRCTDFDA QTWLSTALTN TETCLRGSSD LNVTDFITPI VSNTKISHLI 180 SNCLAINGAL LTAGKNESIT GDSKGSPTWF SGKERRLLQS HSVRANVVVA KDGSGHFKTV 240 QAAIDLAGRR KVMSGRYVIY VKRGIYQENI NVRLNNDNVM LVGDGMRYTI ITSGRSVKGG 300 YTTYSSATAG IEGLHFIAKG IAFRNTAGPA KGQAVALRSS SDLSIFYRCS IEGYQDTLMV 360 HSQRQFYREC YIYGTVDFIF GNAAVVLQNC IILPRRPLKG QSNVTTAQGR SDLFQNTGIS 420 IHKSIILPAS DLIPVVRSVK TYMGRPWMKY SRTVVLKTYI DSVVSPVGWS TWTKGSTYGL 480 DTLFYAEYKN IGPASSTRWR VRWKGFHVLS KASDASAFTV GKFIAGNSWL PSTSIPFTSE 540 L* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 3.0e-145 | 33 | 541 | 519 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 9.0e-147 | 40 | 541 | 551 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-150 | 97 | 541 | 450 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 6.0e-166 | 226 | 527 | 302 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 0 | 1 | 541 | 542 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_199962.1 | 0 | 1 | 541 | 1 | 536 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | NP_199963.1 | 0 | 26 | 541 | 28 | 540 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264861.1 | 0 | 10 | 541 | 7 | 523 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
RefSeq | XP_002322402.1 | 0 | 13 | 541 | 5 | 524 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 34 | 541 | 29 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 219 | 538 | 1 | 316 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 225 | 541 | 3 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 1e-18 | 226 | 496 | 5 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 1e-18 | 226 | 496 | 5 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 1e-18 | 226 | 496 | 5 | 312 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |