| Basic Information | |
|---|---|
| Species | Capsella rubella |
| Cazyme ID | Carubv10028665m |
| Family | GH35 |
| Protein Properties | Length: 720 Molecular Weight: 79219.5 Isoelectric Point: 9.1174 |
| Chromosome | Chromosome/Scaffold: 8 Start: 11889028 End: 11894876 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 39 | 343 | 0 |
| LIIDGQRKLLFSGSIHYPRSTPEMWPSLIKKTKEGGIDVIQTYVFWNLHEPKLGQYDFSGRNDLVKFIKEIRSQGLYVCLRIGPFIEAEWNYGGLPFWLL DVPGMVYRTDNGPFKFHMQKFTTKIVNLMKSEGLYASQGGPIILSQIENEYGNVEAAFREKGASYVKWAGQMAVGLKTGVPWLMCKQPDAPDPVINTCNG MRCGDTFPGPNSPNKPKMWTEDWTSFFQVYGGEPYIRSAEDIAFHAALFIAKNGSYINYYMYHGGTNFGRTSSSYFITGYYDQAPLDEYGLLRQPKYGHL KELHA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 720 Download |
| MESGRVLGLC LILLGTVLVF SGSDGATAAK GVTYDGRSLI IDGQRKLLFS GSIHYPRSTP 60 EMWPSLIKKT KEGGIDVIQT YVFWNLHEPK LGQYDFSGRN DLVKFIKEIR SQGLYVCLRI 120 GPFIEAEWNY GGLPFWLLDV PGMVYRTDNG PFKFHMQKFT TKIVNLMKSE GLYASQGGPI 180 ILSQIENEYG NVEAAFREKG ASYVKWAGQM AVGLKTGVPW LMCKQPDAPD PVINTCNGMR 240 CGDTFPGPNS PNKPKMWTED WTSFFQVYGG EPYIRSAEDI AFHAALFIAK NGSYINYYMY 300 HGGTNFGRTS SSYFITGYYD QAPLDEYGLL RQPKYGHLKE LHAAIKASAN PLLQGKQTIL 360 SLGPLQQAYV FEDASSGCVA FLVNNDAAKV IQIQFRNNAY SLSPKSIGIL QNCKNLIYQT 420 AKVNVAKNTR VTTPVQVFNV PDKWEVFRET IPAFSGTSLK TNSLLEHTNL TKDKTDYLWY 480 TSSFKPDSPC TNPSIYIESS GHVVHVFVNG ALAGSGHGSR DIRVVKLQVP VSLINGQNSI 540 SILSGMVGLP DSGAYMERKS YGLTKVQISC GGSKTIDLSG SQWGYSVGLL GEKVRLQQWK 600 NLKRVKWSTN DAGLINNHPL AWYKTMFDGP NGDSPVGLNM SSMGKGEIWV NGVSIGRYWV 660 SFLTPSGHPS QSIYHIPRAF LKASGNLLVV LEEEGGDPLG ISLNTISVIG SNRAQSQLS* 720 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam13364 | BetaGal_dom4_5 | 0.0005 | 455 | 550 | 103 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. |
| pfam02449 | Glyco_hydro_42 | 7.0e-8 | 54 | 198 | 168 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | LacA | 2.0e-22 | 32 | 321 | 325 | + Beta-galactosidase [Carbohydrate transport and metabolism] |
| pfam01301 | Glyco_hydro_35 | 3.0e-160 | 38 | 345 | 322 | + Glycosyl hydrolases family 35. |
| PLN03059 | PLN03059 | 0 | 20 | 703 | 713 | + beta-galactosidase; Provisional |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF01618.1 | 0 | 1 | 719 | 1 | 718 | beta-galactosidase like protein [Arabidopsis thaliana] |
| EMBL | CAB64742.1 | 0 | 1 | 719 | 1 | 718 | putative beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | NP_568978.2 | 0 | 1 | 719 | 1 | 718 | MUM2 (MUCILAGE-MODIFIED 2); beta-galactosidase [Arabidopsis thaliana] |
| RefSeq | XP_002274012.1 | 0 | 32 | 707 | 62 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002307056.1 | 0 | 32 | 717 | 25 | 710 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 4.00001e-41 | 38 | 341 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0008 | 617 | 695 | 506 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 1e-31 | 32 | 341 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 1e-31 | 32 | 341 | 11 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
