| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10000199m |
| Family | GH116 |
| Protein Properties | Length: 927 Molecular Weight: 104360 Isoelectric Point: 5.7144 |
| Chromosome | Chromosome/Scaffold: 5 Start: 2303352 End: 2309639 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 502 | 863 | 0 |
| GQFLYLEGIEYLMWNTYDVHFYSSFALIMLFPKIQLSIQRDFAAAVMMHDPSKMKLLDDGQWVSRKVLGAVPHDIGICDPWFEVNAYCLYDTARWKDLNP KFVLQVYRDVVATGDKKFAKAVWPSVYVAMAYMDQFDRDGDGMIENDGFPDQTYDTWSVSGISAYSGGLWVAALQAASALAREVGDRGSEDYFWFKFQKA KVVYEKLWNGSYFNYDNSGSSQSSSIQADQLAGQWYARACGLLPIVDEDKARSALEKVYNYNVLKVMGGKRGAVNGMLPDGRVDMSSMQSREIWSGVTYA VAASMIHEDLADIGFQTACGIYEAAWSGTGLGYAFQTPEAWNTDDQYRSLCYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 927 Download |
| MFEGKILENG LHEEEKEPLN SSFDKVDPGK PASLTWQRKL STEEIPLSQF TLNWKETVQL 60 APIGVRILCL IREEAAKGKR AFIDPFIKRH LTSSHGVPLG GVGSGSIGRS YRGEFQRWQI 120 FPRECEDKPV LANQFSAYLM MYVNRDTTAA GIGSWDWNLK GDKSTYHALY PRAWTVHEGE 180 PDPELRIVCR QISPIIPHNY KESSYPVSVF TYTIYNSGKT SADITLLFTW TNSVGGDSEF 240 TGQHYNSKTK TSHQLPPVTF ALAAQETDGV HVSLCPHFVI SGNSLGLTAK DMWHEIKEHG 300 SFDRLNSMET SVTSELGSSI GAAIAASVTV PPDSEGQVTF SLAWDCPEAN FMSGKTYYRR 360 YTKFYGTHQN AAANIARDAI LEHGSWELQI EAWQRPILED KRLPEWYPIT LFNELYYLNA 420 GGSVWTDGSP PVHSLVTIGH RKFSLDWSQS DLKRIVDVPN QNDTAVNILE RMSSILEQIY 480 TPVALNSAFG TNLLQDGEEN IGQFLYLEGI EYLMWNTYDV HFYSSFALIM LFPKIQLSIQ 540 RDFAAAVMMH DPSKMKLLDD GQWVSRKVLG AVPHDIGICD PWFEVNAYCL YDTARWKDLN 600 PKFVLQVYRD VVATGDKKFA KAVWPSVYVA MAYMDQFDRD GDGMIENDGF PDQTYDTWSV 660 SGISAYSGGL WVAALQAASA LAREVGDRGS EDYFWFKFQK AKVVYEKLWN GSYFNYDNSG 720 SSQSSSIQAD QLAGQWYARA CGLLPIVDED KARSALEKVY NYNVLKVMGG KRGAVNGMLP 780 DGRVDMSSMQ SREIWSGVTY AVAASMIHED LADIGFQTAC GIYEAAWSGT GLGYAFQTPE 840 AWNTDDQYRS LCYMRPLAIW AMQWALTRPK PKTLEKWTKP EVTDESLLRY HAGFSKVARL 900 LKLPEEQGAK SLLQSLFDHT CRRMFI* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 1.0e-27 | 95 | 427 | 351 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 4.0e-52 | 96 | 386 | 325 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-63 | 501 | 866 | 384 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-162 | 502 | 864 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAE99037.1 | 0 | 1 | 925 | 1 | 956 | hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_199801.2 | 0 | 1 | 925 | 1 | 956 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002264575.1 | 0 | 6 | 926 | 1 | 949 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 25 | 924 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 1 | 924 | 1 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG703027 | 328 | 520 | 847 | 0 |
| DY292040 | 380 | 515 | 888 | 0 |
| GT176060 | 351 | 409 | 759 | 0 |
| DY669443 | 289 | 328 | 616 | 0 |
| JG704091 | 299 | 549 | 847 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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