y
Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10000352m |
Family | GH3 |
Protein Properties | Length: 777 Molecular Weight: 85150.8 Isoelectric Point: 8.5203 |
Chromosome | Chromosome/Scaffold: 5 Start: 36588687 End: 36592786 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 78 | 331 | 0 |
AIPRLGIPAYEWWSEALHGVAGVGKGIFFNGTIRGATSFPQVILTAASFDSYLWYRIGQAIGLEARALYNAGQAIGMTFWAPNINIFRDPRWGRGQETPG EDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCAD RNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNC |
Full Sequence |
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Protein Sequence Length: 777 Download |
MIFHKLSLVF PLLCLCFTSL LTRVDSTQPP FSCDPSNPST ETFPFCKTTL PISQRARDLV 60 SRLTLDEKIS QLVNSAPAIP RLGIPAYEWW SEALHGVAGV GKGIFFNGTI RGATSFPQVI 120 LTAASFDSYL WYRIGQAIGL EARALYNAGQ AIGMTFWAPN INIFRDPRWG RGQETPGEDP 180 LVTGKYAVSY VRGVQGDTFN GGKLKGKLQA SACCKHFTAY DLDNWKGTTR YKFDARVTMQ 240 DLADTYQPPF ESCVKQGRAS GIMCAYNRVN GIPSCADRNL LSKTARRLWG FHGYITSDCD 300 AVSIIYDAEG YAKSPEDAVV DVLKAGMDVN CGSFLQKHTK AAVKQKKLPE SEIDRALHNL 360 FSVRMRLGLF NGNPTMQPFG KIGADVVCSP AHQVLALQAA QDGIVLLKNS HGLLPLPKSK 420 SVSLALIGPN ANSAKTLLGN YAGPSCRSIT PLQALQNYVE NTVYYPGCDT VACSSASIDK 480 AVNIAKGADH VVLIMGLDQT QEKEELDRVD LVLPGRQQEL ITRVAEAAKK PVILVLLCGG 540 PVDITFAKHD RNIGSILWAG YPGEAGAVAL AEVIFGDHNP GGRLPMTWYP QDYIKVPMTD 600 MKMRPQATSG NPGRTYRFYE GKEVFPFGCG LSYSKYSYKF KSVSQNKLYL NQSSSTKMVE 660 NQDVVHYKSV PELGTEFCET RKFLVTIGVK NHGEMAGKHP VLLFVKPARR GNGRPIKQLV 720 GFQSVILNAK EKAEIVFELS PCESLSRARE DGLMVIEEGT HFLVVGDEEY PISIFV* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 6.0e-50 | 74 | 435 | 366 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-51 | 404 | 631 | 235 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 5.0e-67 | 64 | 356 | 322 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-76 | 14 | 741 | 816 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 4 | 774 | 786 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002285805.1 | 0 | 1 | 776 | 1 | 774 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302284.1 | 0 | 1 | 775 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002302285.1 | 0 | 21 | 776 | 18 | 773 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306583.1 | 0 | 17 | 776 | 14 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513892.1 | 0 | 1 | 776 | 6 | 774 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 114 | 766 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 3u48_A | 0 | 114 | 766 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 3u4a_B | 0 | 114 | 766 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 3u4a_A | 0 | 114 | 766 | 91 | 722 | A Chain A, Galactose Oxidase W290g Mutant |
PDB | 2x41_A | 3.99931e-42 | 54 | 766 | 2 | 699 | A Chain A, Galactose Oxidase W290g Mutant |