| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10000420m |
| Family | GH35 |
| Protein Properties | Length: 725 Molecular Weight: 81432.7 Isoelectric Point: 4.7921 |
| Chromosome | Chromosome/Scaffold: 5 Start: 15801849 End: 15810954 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 33 | 337 | 0 |
| LIIDGQRKILFSGSIHYPRSTPQMWPSLIAKAKEGGLHVIQTYVFWNLHEPQPGEYDFGGRYDLVKFIKEIQAQGLYACLTIGPFIESEWTYGGFPFWLH DVPNIVYRTDNEPFKFYMQNFTTKIVNLMKSSGLYASQGGPIILSQIENEYQNIEKAFGEAGPSYVRWAAKMAVELETGVPWVMCKQTDAPDPVINTCNG MRCGQTFSGPNSPNKPSMWTENWTSFYQVYGGEPYIRSAEDIAFHVTLFIAKNGSYINYYMYHGGTNFGRTASAYIITSYYDQAPLDEYGLTRQPKWGHL KELHG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 725 Download |
| MASCYWVAIL VIIIGEAGCF VEGGNVTYDG RSLIIDGQRK ILFSGSIHYP RSTPQMWPSL 60 IAKAKEGGLH VIQTYVFWNL HEPQPGEYDF GGRYDLVKFI KEIQAQGLYA CLTIGPFIES 120 EWTYGGFPFW LHDVPNIVYR TDNEPFKFYM QNFTTKIVNL MKSSGLYASQ GGPIILSQIE 180 NEYQNIEKAF GEAGPSYVRW AAKMAVELET GVPWVMCKQT DAPDPVINTC NGMRCGQTFS 240 GPNSPNKPSM WTENWTSFYQ VYGGEPYIRS AEDIAFHVTL FIAKNGSYIN YYMYHGGTNF 300 GRTASAYIIT SYYDQAPLDE YGLTRQPKWG HLKELHGAIN SCSETLLQGN PSNFSLGQLQ 360 EAYVFEEEAG GGCVAFLINN DGRDDNATVQ FRNMSFQLPP KSITILPDCI NVIFNTAKVN 420 VVYNERRTNV SEVFNEAERW QQFKDLIPNF LDTPLKADTL LEHMNTTKDK SDYLWYTFSF 480 QTNSSCTEPV LHVESLAHVA HAFVNNVYAG TAHGNHDVKK FTMDIPVDLN DGMNNISILS 540 VMVGLPDSGA FLEKRFAGLA TVEIHCGDME NSYNFTNNYT WGYEVGLLGE KLQIYNTEQN 600 LENAPEWTKI DQYLSSKQPL TWYKTAFDAP VGDDPVALNL SSMGKGEAWV NGLSVGRYWV 660 SFYTSEGNSS QTLYHVPRSF LKSTENVLVL MEEFGGDPLH ISVETISLTN LCQPSFISNH 720 YIPS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 5.0e-6 | 452 | 546 | 96 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 4.0e-20 | 26 | 308 | 326 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 1.0e-152 | 32 | 339 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 25 | 716 | 722 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82672.1 | 0 | 21 | 711 | 21 | 676 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI21611.1 | 0 | 21 | 723 | 21 | 720 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 21 | 723 | 57 | 749 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306647.1 | 0 | 25 | 712 | 1 | 673 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307056.1 | 0 | 6 | 711 | 7 | 704 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 6e-38 | 32 | 346 | 14 | 336 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0005 | 595 | 695 | 498 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-27 | 26 | 322 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-27 | 26 | 322 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
