| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10000559m |
| Family | GT1 |
| Protein Properties | Length: 643 Molecular Weight: 71644 Isoelectric Point: 6.7927 |
| Chromosome | Chromosome/Scaffold: 5 Start: 38753375 End: 38762034 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT1 | 194 | 603 | 0 |
| VGTRGDVQPFLAMAKRLQEFGHRVRLATHANFRTFVRSAGVDFFPLGGDPRVLAGYMARNKGLIPSGPGEISIQRKQIKAIIESLLPACTDPDIETGVPF RSQAIIANPPAYGHAHVAEALGVPIHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYIIVDLLIWWGIRSYINDFRKRKLKLPPIAYFSTYHGSISHLPTA YMWSPHLVPKPSDWGSLVAVVGYCLLNLGSKYQPQENFVQWIQRGPEPIYIGFGSMPLEDPKKTTEIILEALRDTGQRGIIDRGWGDLGKITEVPDNIFL LEDCPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRVQQKGLGPAPIPISQLTVENLSNAVRFMLQPEVKSRAMELAKLIENEDGV AAAVDAFHRH | |||
| Full Sequence |
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| Protein Sequence Length: 643 Download |
| MRSNGFDHPL KDVDKEEGVG GSKTLNKDLW QTDGIDEPMN KYNARAFQSV EKQKTNSLEQ 60 SPVVGISLSK KEDVHSSPRA SLDHCITAPI TRRDSLTDMN EFRYSRSMTE KKSMPRHDLK 120 LDRLSDREKK KLIVELVRIQ NDGTVEVDLD KSAPVASEFL EFQPVEGPPI ILDDTSFSDS 180 KKSIPRLNIA ILVVGTRGDV QPFLAMAKRL QEFGHRVRLA THANFRTFVR SAGVDFFPLG 240 GDPRVLAGYM ARNKGLIPSG PGEISIQRKQ IKAIIESLLP ACTDPDIETG VPFRSQAIIA 300 NPPAYGHAHV AEALGVPIHI FFTMPWTPTY EFPHPLARVP QSAGYWLSYI IVDLLIWWGI 360 RSYINDFRKR KLKLPPIAYF STYHGSISHL PTAYMWSPHL VPKPSDWGSL VAVVGYCLLN 420 LGSKYQPQEN FVQWIQRGPE PIYIGFGSMP LEDPKKTTEI ILEALRDTGQ RGIIDRGWGD 480 LGKITEVPDN IFLLEDCPHD WLFPQCSAVV HHGGAGTTAT GLKAGCPTTI VPFFGDQFFW 540 GDRVQQKGLG PAPIPISQLT VENLSNAVRF MLQPEVKSRA MELAKLIENE DGVAAAVDAF 600 HRHLPDEIPM PSALPEKDDG PDPLQWFFIQ IGNWCCQRCG GV* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR01426 | MGT | 1.0e-9 | 198 | 598 | 412 | + glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production [Cellular processes, Toxin production and resistance]. | ||
| pfam03033 | Glyco_transf_28 | 7.0e-35 | 189 | 333 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 2.0e-37 | 189 | 602 | 423 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 2.0e-127 | 188 | 603 | 420 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18214.1 | 0 | 1 | 640 | 68 | 697 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_175027.1 | 0 | 1 | 642 | 1 | 615 | UDP-glucose:sterol glucosyltransferase, putative [Arabidopsis thaliana] |
| RefSeq | XP_002265312.1 | 0 | 1 | 640 | 52 | 681 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302172.1 | 0 | 1 | 639 | 1 | 615 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524293.1 | 0 | 79 | 639 | 15 | 577 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 2e-33 | 187 | 596 | 1 | 374 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 3h4i_A | 2e-33 | 187 | 596 | 1 | 374 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1iir_A | 4e-29 | 187 | 614 | 1 | 408 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 1rrv_B | 5e-26 | 187 | 587 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 5e-26 | 187 | 587 | 1 | 383 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO801427 | 421 | 216 | 629 | 0 |
| DT547914 | 322 | 205 | 526 | 0 |
| EY702110 | 292 | 111 | 401 | 0 |
| CO103793 | 276 | 200 | 475 | 0 |
| HO801427 | 191 | 187 | 376 | 2e-21 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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