| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10000913m |
| Family | GH5 |
| Protein Properties | Length: 510 Molecular Weight: 56942.3 Isoelectric Point: 6.8926 |
| Chromosome | Chromosome/Scaffold: 5 Start: 36638721 End: 36641298 |
| Description | |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH5 | 214 | 497 | 2.38221e-44 |
| GPQKAPQVMRKHWSTYIVEDDFKFIAGNGLNAVRIPVGWWMASDPAPPAPYVGGSLRALDNAFTWARKYGLRIIIDLHAAPGSQNGFEHSSSRDGSQEWG LTDDNIQQTVAVIDFLTARYARSPSLYAVELINEPLSPGASLESVNKYYKAGYDAVRKHSSTAYVVMSNRLGPMDPRELFPLASGLRGSVIDVHYYNLFS DIFNSMTVQQNIDFVYTNRSAQLNQITTSNGPLTFVGEWVAEWQVSGASKEDLRRFAKAQLEVYGRATFGWAYWTLKNVNNHWS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 510 Download |
| MAIMFSTKQL FSICIILSFM LSFSYGRSLN PAFRIKAVNL GGWLVTEGWI KPSLFDGIPN 60 KDFLDGTQLQ FKSVTVGKYL CAENGGGTIV VANRTSASGW ETFKLWRINE TNFHFRVFNK 120 QFIGLDTNGN GIDIVAESNT PGSSETFEIV RNSNDLSRVR IKAPNGFFLQ AKTEELVTAD 180 YEGATSWGDD DPSVFEMTIA GRMQGEFQVT NGYGPQKAPQ VMRKHWSTYI VEDDFKFIAG 240 NGLNAVRIPV GWWMASDPAP PAPYVGGSLR ALDNAFTWAR KYGLRIIIDL HAAPGSQNGF 300 EHSSSRDGSQ EWGLTDDNIQ QTVAVIDFLT ARYARSPSLY AVELINEPLS PGASLESVNK 360 YYKAGYDAVR KHSSTAYVVM SNRLGPMDPR ELFPLASGLR GSVIDVHYYN LFSDIFNSMT 420 VQQNIDFVYT NRSAQLNQIT TSNGPLTFVG EWVAEWQVSG ASKEDLRRFA KAQLEVYGRA 480 TFGWAYWTLK NVNNHWSLEW MIKNGYIKL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2723 | BglB | 0.002 | 182 | 252 | 71 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
| cd00257 | Fascin | 9.0e-9 | 67 | 187 | 121 | + Fascin-like domain; members include actin-bundling/crosslinking proteins facsin, histoactophilin and singed; identified in sea urchin, Drosophila, Xenopus, rodents, and humans; The fascin-like domain adopts a beta-trefoil topology and contains an internal threefold repeat; the fascin subgroup contains four copies of the domain; Structurally similar to fibroblast growth factor (FGF) | ||
| pfam00150 | Cellulase | 4.0e-11 | 225 | 491 | 283 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 9.0e-28 | 224 | 506 | 321 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0030674 | protein binding, bridging |
| GO:0051015 | actin filament binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18831.1 | 0 | 7 | 509 | 7 | 505 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001064458.1 | 0 | 20 | 509 | 17 | 508 | Os10g0370500 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002285806.1 | 0 | 6 | 509 | 5 | 508 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002464704.1 | 0 | 31 | 509 | 39 | 514 | hypothetical protein SORBIDRAFT_01g024390 [Sorghum bicolor] |
| RefSeq | XP_002513884.1 | 0 | 6 | 509 | 5 | 506 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1eqp_A | 2e-40 | 192 | 505 | 26 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1eqc_A | 3e-40 | 192 | 505 | 26 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans |
| PDB | 1cz1_A | 3e-40 | 192 | 505 | 26 | 376 | A Chain A, Exo-B-(1,3)-Glucanase From Candida Albicans At 1.85 A Resolution |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DC898905 | 381 | 129 | 509 | 0 |
| JG564701 | 303 | 193 | 495 | 0 |
| DC899299 | 319 | 191 | 509 | 0 |
| EE076947 | 276 | 65 | 340 | 0 |
| EL450599 | 310 | 36 | 345 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
