Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10000997m |
Family | GT47 |
Protein Properties | Length: 481 Molecular Weight: 54817.8 Isoelectric Point: 9.2831 |
Chromosome | Chromosome/Scaffold: 5 Start: 39589973 End: 39592011 |
Description | Exostosin family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 60 | 404 | 0 |
SIKVYVADLPRSYNYGLIDQYWASTSPDSRLPSDPDHQTPHPHPPNRYPENPLIKQYSAEYWIMGDLETPQNLRTNSFAKRVFDANEADVVFVPFFATLS AEMELAKAKQKNMFRKKGDGNEDYKRQKEVIDFVINSDPWKRSGGRDHVFVLTDPVAMWHVRSQIAPAILLVVDFGGWYRLDSKSSNGNSSEMIQHTQVS LLKDVIVPYTHLLPRLYLSDNKKRQNLLYFKGAKHRHRGGVVREKLWDLLVNEAGVIMEEGFPNATGREQSIKGMRSSEFCLHPAGDTPTSCRLFDAIQS LCIPVIVSDNIELPFEGMVDYFEFSVFVALRDALTPNWLVRHLRS |
Full Sequence |
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Protein Sequence Length: 481 Download |
MATMKKYHYT SKSSICLSLT LLSIVSLSFF FFFFITANKN PTSSASSDQQ LRIQTSNPNS 60 IKVYVADLPR SYNYGLIDQY WASTSPDSRL PSDPDHQTPH PHPPNRYPEN PLIKQYSAEY 120 WIMGDLETPQ NLRTNSFAKR VFDANEADVV FVPFFATLSA EMELAKAKQK NMFRKKGDGN 180 EDYKRQKEVI DFVINSDPWK RSGGRDHVFV LTDPVAMWHV RSQIAPAILL VVDFGGWYRL 240 DSKSSNGNSS EMIQHTQVSL LKDVIVPYTH LLPRLYLSDN KKRQNLLYFK GAKHRHRGGV 300 VREKLWDLLV NEAGVIMEEG FPNATGREQS IKGMRSSEFC LHPAGDTPTS CRLFDAIQSL 360 CIPVIVSDNI ELPFEGMVDY FEFSVFVALR DALTPNWLVR HLRSFSEEQK DKFRHRMAEI 420 QPIFVYENNH PGGIGPILPD GAVNHVWKKV HQKLPMIKEA IVRAKRKPPG VSIPLRCHCT 480 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 1.0e-60 | 58 | 405 | 361 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564443.1 | 0 | 35 | 479 | 40 | 476 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002270238.1 | 0 | 11 | 480 | 18 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002325567.1 | 0 | 14 | 480 | 17 | 476 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327326.1 | 0 | 25 | 480 | 1 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002533317.1 | 0 | 59 | 480 | 53 | 478 | catalytic, putative [Ricinus communis] |