| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10001020m |
| Family | GH35 |
| Protein Properties | Length: 477 Molecular Weight: 53126.7 Isoelectric Point: 8.3691 |
| Chromosome | Chromosome/Scaffold: 5 Start: 24748816 End: 24753902 |
| Description | beta-galactosidase 7 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 26 | 121 | 1.79997e-41 |
| NNPKSPKMWTENWTGWFKKWGDKDPHRTPQDVSFAVARFFQAGGVLQNYYMYHGGTNFGRDAGGPFIITSYDYDAPLDEYGNLNQPKWGHLKQLHE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 477 Download |
| MCQQSGAPQP MINTCNGFYC DEFVPNNPKS PKMWTENWTG WFKKWGDKDP HRTPQDVSFA 60 VARFFQAGGV LQNYYMYHGG TNFGRDAGGP FIITSYDYDA PLDEYGNLNQ PKWGHLKQLH 120 EAIKLGEKIL TSGNVTTKQF GNGVNLTTYS NTTSGERFCF LSNTNTSQDA NVDLQQDGKY 180 FVPAWSVSIL HGCNKEVYNT AKVNTETTVM VKKPIELGTK LSWMWAQETI RDTLHGKGRF 240 NATKLIEQKE ATSDESDYLW YMTSIENMGK SSHNATLYVK SSGQVLHAYV NSKHIGSQFG 300 YDFEFKQPAI LRPGKNFLTL LSATVGLQNY GEFFDLGPEG LAGGPVELNV DGMASLNLSS 360 NIWNYKVGLN GEAKRLYDPN SPHAHIWKTS KKLPIGKPMK WYKTSFKIPP GTSPVVVDLQ 420 GMGKGHAWVN GNSLGRYWPS QIADTNGCSD TCDYRGEYKP EKCVTNCGNP SQRCKG* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-52 | 1 | 123 | 135 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 3.0e-130 | 1 | 473 | 484 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27773.1 | 0 | 1 | 473 | 230 | 707 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002276918.1 | 0 | 1 | 473 | 161 | 638 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324727.1 | 0 | 1 | 473 | 161 | 650 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002326135.1 | 0 | 1 | 473 | 220 | 692 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516236.1 | 0 | 12 | 473 | 164 | 630 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4e8d_B | 0.0000000001 | 23 | 107 | 225 | 314 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
| PDB | 4e8d_A | 0.0000000001 | 23 | 107 | 225 | 314 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
| PDB | 4e8c_B | 0.0000000001 | 23 | 107 | 225 | 314 | A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In Complex With Galactose |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| DY283799 | 330 | 146 | 475 | 0 |
| FC887049 | 322 | 146 | 467 | 0 |
| DY264749 | 312 | 1 | 312 | 0 |
| FC915116 | 271 | 1 | 271 | 0 |
| HO778160 | 483 | 1 | 473 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |