Basic Information | |
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Species | Citrus clementina |
Cazyme ID | Ciclev10001717m |
Family | GH17 |
Protein Properties | Length: 345 Molecular Weight: 38207.3 Isoelectric Point: 4.8406 |
Chromosome | Chromosome/Scaffold: 5 Start: 36927764 End: 36929032 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 31 | 341 | 0 |
IGVNYGLNGDNLPPPEQVIDLYGRCQINFVRLFEPRHEVLEALRGRPQLVSLGTKNEEIQSIASSQQASDEWVKTHVVPFVDNVNIGYITVGNEVIPGTN AQYVGQAINNILNSLNNYGITKQIKVTTVLAGTSLASSYPPSAGAFTNEAAAVLKDIAQNLWHRGFPIMINVYPYFAYASDPSHISLDYALFQSKDPVVR DGPYLYYNLFDAMVDAYYSALEKIDVPNVTLAISESGWPSAGNEPYTSIENAQKYNKNLMDHVLGAKGTPRRPGQTFDTFLFEMFNENQKPAGVEQNFGF FYPNMQPIYPF |
Full Sequence |
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Protein Sequence Length: 345 Download |
MESIWARGML VAAAILVIRI QLLAFTGANV IGVNYGLNGD NLPPPEQVID LYGRCQINFV 60 RLFEPRHEVL EALRGRPQLV SLGTKNEEIQ SIASSQQASD EWVKTHVVPF VDNVNIGYIT 120 VGNEVIPGTN AQYVGQAINN ILNSLNNYGI TKQIKVTTVL AGTSLASSYP PSAGAFTNEA 180 AAVLKDIAQN LWHRGFPIMI NVYPYFAYAS DPSHISLDYA LFQSKDPVVR DGPYLYYNLF 240 DAMVDAYYSA LEKIDVPNVT LAISESGWPS AGNEPYTSIE NAQKYNKNLM DHVLGAKGTP 300 RRPGQTFDTF LFEMFNENQK PAGVEQNFGF FYPNMQPIYP FWPC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 258 | 334 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-103 | 31 | 341 | 312 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN05912.1 | 0 | 1 | 344 | 1 | 319 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ABN05913.1 | 0 | 1 | 344 | 1 | 338 | Glycoside hydrolase, family 17 [Medicago truncatula] |
GenBank | ACF06549.1 | 0 | 12 | 341 | 10 | 336 | beta-1,3-glucanase [Elaeis guineensis] |
RefSeq | XP_002302261.1 | 0 | 28 | 344 | 4 | 319 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002306606.1 | 0 | 32 | 342 | 1 | 309 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 31 | 339 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 31 | 334 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 31 | 334 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 31 | 334 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 31 | 334 | 2 | 306 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DC899652 | 345 | 16 | 342 | 0 |
GR710242 | 279 | 38 | 316 | 0 |
DC899993 | 132 | 214 | 345 | 0 |
JK802300 | 238 | 105 | 342 | 0 |
JK804435 | 231 | 112 | 342 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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