| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10003299m |
| Family | CE8 |
| Protein Properties | Length: 319 Molecular Weight: 35581.2 Isoelectric Point: 8.7355 |
| Chromosome | Chromosome/Scaffold: 5 Start: 4751734 End: 4752845 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 7 | 302 | 0 |
| DVIVAQDSSGNYTKISDAILAAPSFSRKPYYIKIKEGNYTKYVVVGREKTNLVLIGNGINNTIISGNKSHGNGHLSTYQTATVAIKGPGFVAMNITFENT AGPDQETGQAVALLSEVDSAFYRCKFVGYQDTLYAGRNKQFYRECDIYGTIDFIFGDASAVFQNCNIYVRFLGGNVKTITAEGREEPEGNGGIIIHNCTI TAAEDFPKDRTSIKTYLGRPWRNYSRTVILQTFLDEIIDPEGWLEWQGQSVDTIYYAEYNNRGPGSNTTGRIRWKGYRILKRLEAENFTVKKFISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 319 Download |
| KITQRIDVIV AQDSSGNYTK ISDAILAAPS FSRKPYYIKI KEGNYTKYVV VGREKTNLVL 60 IGNGINNTII SGNKSHGNGH LSTYQTATVA IKGPGFVAMN ITFENTAGPD QETGQAVALL 120 SEVDSAFYRC KFVGYQDTLY AGRNKQFYRE CDIYGTIDFI FGDASAVFQN CNIYVRFLGG 180 NVKTITAEGR EEPEGNGGII IHNCTITAAE DFPKDRTSIK TYLGRPWRNY SRTVILQTFL 240 DEIIDPEGWL EWQGQSVDTI YYAEYNNRGP GSNTTGRIRW KGYRILKRLE AENFTVKKFI 300 SGDKWIPSTG IPFFPGLL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 1.0e-109 | 7 | 317 | 315 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 1.0e-111 | 7 | 317 | 314 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 4.0e-114 | 8 | 318 | 317 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02713 | PLN02713 | 7.0e-123 | 8 | 318 | 317 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-139 | 7 | 303 | 301 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACQ85264.1 | 0 | 7 | 317 | 253 | 564 | pectin methylesterase [Musa acuminata AAA Group] |
| DDBJ | BAF42040.1 | 0 | 8 | 313 | 251 | 559 | pectin methylesterase 3 [Pyrus communis] |
| RefSeq | XP_002301486.1 | 0 | 5 | 317 | 136 | 449 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511679.1 | 0 | 5 | 317 | 201 | 514 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| RefSeq | XP_002523113.1 | 0 | 5 | 317 | 243 | 556 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 7 | 317 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 7 | 317 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-23 | 7 | 308 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-23 | 7 | 308 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-23 | 7 | 308 | 5 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
 | ||||
| Hit | Length | Start | End | EValue |
| HO778758 | 317 | 5 | 317 | 0 |
| HO852920 | 318 | 3 | 317 | 0 |
| FE709060 | 240 | 82 | 317 | 0 |
| ES850416 | 313 | 6 | 313 | 0 |
| GD253122 | 238 | 83 | 317 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |