| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10003402m |
| Family | GH9 |
| Protein Properties | Length: 481 Molecular Weight: 53495.2 Isoelectric Point: 6.0312 |
| Chromosome | Chromosome/Scaffold: 5 Start: 41837537 End: 41839560 |
| Description | glycosyl hydrolase 9B5 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 10 | 465 | 0 |
| NYVAALKIAMQFFDIQKSGKLVNNQIKWRGDSGLKDGKEVDLELSKGMYDAGDAVKFGFPLAFTATMLSWTILERGQRMGMEGVDQLQKAKDSVKWITDY LVNAHPKDNVLYVQVGDAEKDHKCWQRPESITDNKPLFQINTTAPGSDVAAETAAALASASLVFKKSDPPYSAKLLEHAKKLFIFADKYREYYSVSLPQV KKYYNSTGYGDELLWAASWLYHATQENIYKDYVVGSEAEEFADWGKPSWFSWDNKLAGVQVLLSRVYFFHGKDNTKLAKYQKSAQALMCTLLPESPSATS DRTNGGLIWIAEWNALQHPVAVAFLASLYGDYMEKSDNENLECDEKTFKSEDLREFAKKQADYVLGDNPNSMSYLVGYSKKFPKFVHHRGASIPADATTG CKDGYQWLESTKPNPNEATGALVGGPFMNETYIDSRNNSMQGEPTTYNSALLVGLL | |||
| Full Sequence |
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| Protein Sequence Length: 481 Download |
| VEPSESHKHN YVAALKIAMQ FFDIQKSGKL VNNQIKWRGD SGLKDGKEVD LELSKGMYDA 60 GDAVKFGFPL AFTATMLSWT ILERGQRMGM EGVDQLQKAK DSVKWITDYL VNAHPKDNVL 120 YVQVGDAEKD HKCWQRPESI TDNKPLFQIN TTAPGSDVAA ETAAALASAS LVFKKSDPPY 180 SAKLLEHAKK LFIFADKYRE YYSVSLPQVK KYYNSTGYGD ELLWAASWLY HATQENIYKD 240 YVVGSEAEEF ADWGKPSWFS WDNKLAGVQV LLSRVYFFHG KDNTKLAKYQ KSAQALMCTL 300 LPESPSATSD RTNGGLIWIA EWNALQHPVA VAFLASLYGD YMEKSDNENL ECDEKTFKSE 360 DLREFAKKQA DYVLGDNPNS MSYLVGYSKK FPKFVHHRGA SIPADATTGC KDGYQWLEST 420 KPNPNEATGA LVGGPFMNET YIDSRNNSMQ GEPTTYNSAL LVGLLSSLAT SSQSVVTSLG 480 * 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00119 | PLN00119 | 1.0e-135 | 10 | 457 | 456 | + endoglucanase | ||
| PLN02171 | PLN02171 | 2.0e-141 | 9 | 457 | 463 | + endoglucanase | ||
| PLN02340 | PLN02340 | 1.0e-141 | 5 | 454 | 463 | + endoglucanase | ||
| pfam00759 | Glyco_hydro_9 | 4.0e-151 | 10 | 456 | 451 | + Glycosyl hydrolase family 9. | ||
| PLN02345 | PLN02345 | 0 | 14 | 457 | 449 | + endoglucanase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAF42037.1 | 0 | 3 | 475 | 49 | 522 | cellulase2 [Pyrus communis] |
| RefSeq | XP_002276739.1 | 0 | 11 | 479 | 55 | 524 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002300715.1 | 0 | 3 | 475 | 47 | 519 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307711.1 | 0 | 11 | 479 | 55 | 522 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510516.1 | 0 | 3 | 475 | 47 | 519 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 9 | 469 | 3 | 430 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1ksc_A | 0 | 9 | 469 | 3 | 430 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1ks8_A | 0 | 9 | 469 | 3 | 430 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_B | 0 | 10 | 469 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 4tf4_A | 0 | 10 | 469 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GR218282 | 312 | 148 | 457 | 0 |
| DY289547 | 323 | 126 | 445 | 0 |
| GR218283 | 312 | 148 | 457 | 0 |
| HO782038 | 291 | 172 | 457 | 0 |
| HO760453 | 288 | 173 | 455 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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