| Basic Information | |
|---|---|
| Species | Citrus clementina |
| Cazyme ID | Ciclev10003478m |
| Family | GH35 |
| Protein Properties | Length: 803 Molecular Weight: 89884.9 Isoelectric Point: 8.7814 |
| Chromosome | Chromosome/Scaffold: 5 Start: 37616213 End: 37622284 |
| Description | beta-galactosidase 16 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH35 | 32 | 327 | 0 |
| LIINGHRKILFSGSIHYPRSTPQMWPSLIAKAKEGGLDVIQTYVFWNLHEPQKGQYDFSGRNDIIRFIKEIQSQGLYVCLRIGPFIESEWTYGGLPIWLH DVAGIVFRSDNKPYKIVNMMKSEKLYASQGGPIILSQIENEYQTIEPAFHEKGPPYVLWAAKMAVDLHTGVPWVMCKQDDAPGPVINACNGMRCGETFKG PNSPNKPSIWTEDWTSFYQVWGGKPYIRSAQDIAFHVALFIAKNGSYVNYYMYHGGTNFGRTAAAFMITGYYDQAPLDEYGLVREPKWGHLKELHA | |||
| Full Sequence |
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| Protein Sequence Length: 803 Download |
| MESESAVYGR GHRHEHHDDR DHRNVTYDGR SLIINGHRKI LFSGSIHYPR STPQMWPSLI 60 AKAKEGGLDV IQTYVFWNLH EPQKGQYDFS GRNDIIRFIK EIQSQGLYVC LRIGPFIESE 120 WTYGGLPIWL HDVAGIVFRS DNKPYKIVNM MKSEKLYASQ GGPIILSQIE NEYQTIEPAF 180 HEKGPPYVLW AAKMAVDLHT GVPWVMCKQD DAPGPVINAC NGMRCGETFK GPNSPNKPSI 240 WTEDWTSFYQ VWGGKPYIRS AQDIAFHVAL FIAKNGSYVN YYMYHGGTNF GRTAAAFMIT 300 GYYDQAPLDE YGLVREPKWG HLKELHAAIK LCSRPLLTGT QNVIPLGQLQ EAYVFEETSG 360 VCAAFLVNND ERKAVTVLFR NISYELPRKS ISILPDCKTV AFNTERVSTQ YNKRSKTSNL 420 KFDSDEKWEE YREAIPNFDN TLLRAEGLLD QISAAKDASD YLWYTFRFHY NSSNAQAPLD 480 VQSHGHILHA FVNGEYTGSA HGSHDNVSFT LRNTVHLRQG TSDGALLSVT VGLPDSGAFL 540 ERKVAGVHRV RVQDKSFTNC SWGYQVGLIG EKLQIYSNLG LNKVLWSSIR SPTRQLTWYK 600 TTFRAPAGND PIALNLQSMG KGEAWVNGQS IGRYWVSFKT SKGNPSQTQY HVPRAFLKPT 660 GNLLVLLEEE NGNPLGITVD TIAITKVCGH VTNSHLPPLS SWLRHRQRGD TDIKKFGKKP 720 TVQLSCPLGK KISKIVFASF GNPDGDCERY AGGSCHSSHS QGVVERACIG KSRCSIPLLS 780 RYFGGDPCPG IHKALLVDAQ CR* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-5 | 47 | 182 | 170 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 1.0e-20 | 724 | 801 | 81 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 4.0e-22 | 25 | 305 | 327 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 8.0e-146 | 31 | 329 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 24 | 801 | 827 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI18991.1 | 0 | 26 | 802 | 33 | 821 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284529.1 | 0 | 26 | 802 | 25 | 813 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302225.1 | 0 | 24 | 801 | 7 | 797 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002306647.1 | 0 | 24 | 801 | 1 | 763 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002520337.1 | 0 | 24 | 801 | 39 | 770 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 6e-38 | 31 | 325 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0007 | 595 | 668 | 507 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-30 | 25 | 316 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-30 | 25 | 316 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 2e-30 | 25 | 316 | 11 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| HO778160 | 682 | 24 | 660 | 0 |
| HO780602 | 591 | 75 | 638 | 0 |
| HO795552 | 531 | 115 | 618 | 0 |
| HO795552 | 53 | 24 | 76 | 0 |
| HO795552 | 40 | 76 | 115 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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