CAZyme Information

Basic Information
SpeciesCitrus clementina
Cazyme IDCiclev10003490m
FamilyGT4
Protein PropertiesLength: 494 Molecular Weight: 55748 Isoelectric Point: 8.1744
ChromosomeChromosome/Scaffold: 5 Start: 28834668 End: 28836149
DescriptionUDP-Glycosyltransferase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT43134481.4e-23
  VLGVAGRLVKDKGHPLLHEAFSKLMVKYPDVYLIVAGSGPWEQRYKDFGRQVLVMGSMSPAELRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPVMAS
  RFPSIKGTIVVDDEFGFMFAPNVESLHKTLEAAVSE
Full Sequence
Protein Sequence     Length: 494     Download
MAFNNKPKKT NPSFWQSNLC ITLFFIVIFT IPALFLLHTP TNLICPNLAT NHNVNKPWSG    60
DLRNAEFAWN LLSFLQNQPS KFTLKIAVFS RKWPISTTPG GMERHAHTLH VALARRGHRV    120
HIFTSPVDNI NSPSISHQEN DDGSNNKYPL LHFHEGEADK WRYSKGWEQF DEENQREPFD    180
VVHSESVALP HWLARNVTNL AVSWHGIALE SLQSGIFQDL TRKPLEPMSP AFNKSLQGVM    240
LKVLNEIRFF NNYAHHVAIS DSCGEMLRDV YQIPSERVHV ILNGINENEY GVDLSLGQSF    300
RSRIGIPKNA SLVLGVAGRL VKDKGHPLLH EAFSKLMVKY PDVYLIVAGS GPWEQRYKDF    360
GRQVLVMGSM SPAELRAFYN AIDIFVNPTL RPQGLDLTLM EAMMSGKPVM ASRFPSIKGT    420
IVVDDEFGFM FAPNVESLHK TLEAAVSEGP MRLAQRGEAC RQYAASMFTA NKMALAYERL    480
FLCIKNETFC DYP* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd03807GT1_WbnK_like4.0e-30248481243+
COG0438RfaG5.0e-3385487413+
TIGR00032argG1.0e-33100480404+
cd03798GT1_wlbH_like4.0e-4086481411+
cd03801GT1_YqgM_like6.0e-6385481408+
Gene Ontology
GO TermDescription
GO:0009058biosynthetic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
RefSeqXP_002271072.103849337493PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002271108.1014931492PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002303479.1014921488predicted protein [Populus trichocarpa]
RefSeqXP_002326600.1014921487predicted protein [Populus trichocarpa]
RefSeqXP_002519899.1014932486glycosyltransferase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3c4v_B0.000002271431183353A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3)
PDB3c4v_A0.000002271431183353A Chain A, Crystal Structure Of Brassica Juncea Chitinase Catalytic Module (Bjchi3)
PDB3c4q_B0.000002271431183353A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
PDB3c4q_A0.000002271431183353A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp
PDB3c48_B0.000002271431203373A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure.
Transmembrane Domains
StartEnd
1335
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
AM7324152861744590
GR1862222621864470
EX26844735113510
FG1633432572364920
EX263793286303150
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_055_00071.1Aquca_004_00554.1
Arabidopsis lyrata316266919149492915
Arabidopsis thalianaAT1G73160.1AT5G59070.1AT4G19460.1
Brachypodium distachyonBradi2g45370.1
Brassica rapaBra012542Bra003857Bra013399Bra020331
Carica papayaevm.model.supercontig_305.3
Capsella rubellaCarubv10004612mCarubv10021524m
Citrus clementinaCiclev10008126m
Citrus sinensisorange1.1g039338morange1.1g044542m
Cucumis sativusCucsa.268510.1
Eucalyptus grandisEucgr.E01172.1Eucgr.F03250.1
Fragaria vescamrna27708.1-v1.0-hybridmrna27178.1-v1.0-hybrid
Glycine maxGlyma09g34990.1Glyma01g35440.1Glyma16g17250.1Glyma16g08210.1
Gossypium raimondiiGorai.009G372800.1Gorai.008G217900.1
Linum usitatissimumLus10032187Lus10014499Lus10033297Lus10034760
Malus domesticaMDP0000252217MDP0000510770MDP0000280727MDP0000690085
Manihot esculentacassava4.1_023608mcassava4.1_022788m
Medicago truncatulaMedtr5g026360.1Medtr8g071900.1
Mimulus guttatusmgv1a005617mmgv1a027119m
Oryza sativaLOC_Os01g46430.1
Panicum virgatumPavirv00039421mPavirv00050283m
Physcomitrella patensPp1s115_97V6.1Pp1s115_97V6.2Pp1s231_59V6.1
Phaseolus vulgarisPhvul.002G124600.1Phvul.003G277200.1
Picea abiesMA_159118g0690MA_58772g0010
Populus trichocarpaPotri.011G097000.1Potri.003G105500.1Potri.001G128300.1
Prunus persicappa004871mppa024212m
Ricinus communis30150.m00047029827.m002616
Setaria italicaSi001150m
Selaginella moellendorffii79637
Sorghum bicolorSb03g029770.1
Thellungiella halophilaThhalv10013459mThhalv10027268mThhalv10019571m
Vitis viniferaGSVIVT01036920001GSVIVT01036921001GSVIVT01036924001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny